Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0305 ATGGTGAAGAAGGTACAAGGCAAATTAATATTAATTTTCCCACTAATTGTCTTGTCAATAATCTCCGTTCTTGTTAGAATTGGAGAAGCTCAATCCAGTTCCTTTCTTATAAACTGTGGTGCAAATTTTAGTGTTAATATTGATGGAAGGAAATGGATTGGAGACTTGGCTTATGAAAATTCCAACCTCACTCTAAATAATCTGGAAATTGCTGTTTCCACCACCCTATTATCCAACGATTCGATCTATTCTCCTCTCTATAAAACCGCCCGGGTATTTACCTCTCCTTTAAATTACACCCTTAAAGGGATCCATGGAAATTATTTTCTCAGGCTTCATTTTTTCCCCTTCCCTTTTGGTGGAGATTTTAATAATGTTAACACTTCTTCGTTTCAAGTTCTAGCAAATGGGCTTAGACTTGTTTCAGAATTCAATGTTCCAACTGAGATTTCTCGCAAGAATGTTCGCTTCCAGGGCTCGACAAGTAATTCAAGTCTAATCAAAGAATTTGTTATTTGGATCGATTCGGACTTGCTTGTTATTGAGTTTGTTCCAAGTAAAGGCTCGTTTGGGTTTATTAATGCAATTGAAATTGTCCATTTAGGGGATTGGATTTTTCTGGGTTTGGTGAATAGAGTTGGGGGAAATGGTGTAAATGTGGATTTACATGGAAGGGGGATTGAAACTATGTATCGATTGAATGTAGGCGGGCGTCAAATTAAACCCGATGAGGATTTAGATCTTTGGAGAAGGTGGGAAGTTGATTATAACTATATGATCACAGCAGATGCCGGGTCAGAGATTAATAACAAGACTTATGTTAGCTATGCTTCTATGAATGATTCATTACTAGCTCCTCTACCTGTTTATGAAACAGCTAGAACAATGTCAGAGACCGAAGTGTTGCAGAGAAGGTTTAATATGTCGTGGAAATTTGAAGTGGACCCTAATTTTGAATACTTGATTCGGCTGCATTTTTGTGAGCTAGTCTATAATGAGGCGAATCAGAGGAGGTTTAGGATCTTTATAAATAATCGGACAGCCGCCGATAATTTTGATATTTTTGTTCGTGCAAATGGATCAAACAAAGCATACCATGAGGATTTTGTTGATACTCTTTCGTCCAAAATCAGTACTTTATGGATCCAACTGGGTCCAGATGTTGGAACAGGTGCAGCCGGAACTGATGCTCTTCTAAACGGATTGGAGATTTTCAAGCTTAGTAAAGATGGAAATCTCGGCTATGTTGGAAAGTATTATAATTCACTTAATGTTGATGAGAAAAATTCCGAAAAAGCTCGAAGAATTCTTTGGGTTGGCATTGGAGTGGGTTTAGGTTTTCTTGTCTTACTTGTTATTATCATAGCCCTCATTTGTTGTTTATGCAAAACACGAATAAGGAAATTAGGGGTTACGAAAAATAAATCTCTCGGGTTAAAACCATTGTCTCTGAAGGCAGCAGATCATAGCTCTAGAGGAGGTGTAGAAAGTCAAGGTGCAACTGGGTCTAGGGTTGGTAAGAGGTTTACTTTAACGGAAATTCGGTTAGCAACCAATGATTTCGATGAAAGTTTAGTGATAGGAGAAGGGGGTTTTGGAAAAGTTTACAAAGGGGTGATAGATGAGGACGGAACACTTGCAGCAATCAAAAGGGCCAAACCGAAATCTGAACAGGGCCTTGTGGAATTCGAGACGGAAATTGAAATGCTTTCGAAACTAAGGCATAGGCATTTGGTCGCCATGATTGGTTATTGTGATGAACAAAATGAAATGGTTTTGGTTTATGAGTATATGGCAAATGGAACCTTCCGGAACCATCTTTTCGATAGTGGTCTCCCTCCTTTAACTTGGAAGCAACGATTGGAAATTTGCGTCGGTTCGGCACGAGGGCTTCATTACCTTCATACTGGTGCAGAGAGGGGAATAATCCATAGAGATGTTAAGACAACTAACATATTGTTGGACGAAAACTTCATGGCGAAAATGTCCGATTTCGGGCTGTCTAAGACGGGGCCCGCTATGGACCATACCCATGTTAGTACGGCAGTTAAAGGGAGCTTTGGGTACCTTGACCCGGAGTATTTCAGACGTCAGCAATTAACCGAAAAATCTGACGTGTATTCTTTTGGAGTGGTTTTGTGGGAAGTTGTTTGTGCAAGGACGGTTATAAATCCAAGTTTGCCGAAAGATGAGATAAATCTTGCAGAATGGGCAATGAGGTGGCAGACAGAGAAATCATTGGAATCTATCATTGACCCATTTCTTGAAGGGAAGTATTGTCCAGAATCATTGAAGAAATATGGGGATTTAGCGGAGAAGTGTTTAGCTGATGAAGGGAAGAACAGGCCGACAATGGGGGAAGTTTTATGGAATTTGGAGTATGTTCTGCAAATCCATGAAGCTTGGATGCGTAAAAATGATGAAGAGACTTCGTTTTCAAGTAGTCAGGCCTTAGATGAATAG 2463 39.71 MVKKVQGKLILIFPLIVLSIISVLVRIGEAQSSSFLINCGANFSVNIDGRKWIGDLAYENSNLTLNNLEIAVSTTLLSNDSIYSPLYKTARVFTSPLNYTLKGIHGNYFLRLHFFPFPFGGDFNNVNTSSFQVLANGLRLVSEFNVPTEISRKNVRFQGSTSNSSLIKEFVIWIDSDLLVIEFVPSKGSFGFINAIEIVHLGDWIFLGLVNRVGGNGVNVDLHGRGIETMYRLNVGGRQIKPDEDLDLWRRWEVDYNYMITADAGSEINNKTYVSYASMNDSLLAPLPVYETARTMSETEVLQRRFNMSWKFEVDPNFEYLIRLHFCELVYNEANQRRFRIFINNRTAADNFDIFVRANGSNKAYHEDFVDTLSSKISTLWIQLGPDVGTGAAGTDALLNGLEIFKLSKDGNLGYVGKYYNSLNVDEKNSEKARRILWVGIGVGLGFLVLLVIIIALICCLCKTRIRKLGVTKNKSLGLKPLSLKAADHSSRGGVESQGATGSRVGKRFTLTEIRLATNDFDESLVIGEGGFGKVYKGVIDEDGTLAAIKRAKPKSEQGLVEFETEIEMLSKLRHRHLVAMIGYCDEQNEMVLVYEYMANGTFRNHLFDSGLPPLTWKQRLEICVGSARGLHYLHTGAERGIIHRDVKTTNILLDENFMAKMSDFGLSKTGPAMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLWEVVCARTVINPSLPKDEINLAEWAMRWQTEKSLESIIDPFLEGKYCPESLKKYGDLAEKCLADEGKNRPTMGEVLWNLEYVLQIHEAWMRKNDEETSFSSSQALDE 820
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2291079 2294021 + Conep01aG0032300.1 Cone1ag0305 430996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0305 820 FunFam Receptor-like protein kinase FERONIA 226 409 - -
Cone1ag0305 820 PANTHER OS07G0166700 PROTEIN 509 799 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Cone1ag0305 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag0305 820 SUPERFAMILY Protein kinase-like (PK-like) 505 794 IPR011009 -
Cone1ag0305 820 ProSitePatterns Protein kinases ATP-binding region signature. 527 550 IPR017441 GO:0005524(InterPro)
Cone1ag0305 820 ProSiteProfiles Protein kinase domain profile. 521 795 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag0305 820 FunFam Receptor-like protein kinase FERONIA 598 812 - -
Cone1ag0305 820 Gene3D - 226 410 - -
Cone1ag0305 820 Gene3D - 30 201 - -
Cone1ag0305 820 SMART serkin_6 521 795 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag0305 820 Pfam Malectin-like domain 37 406 IPR024788 -
Cone1ag0305 820 Gene3D Phosphorylase Kinase; domain 1 506 597 - -
Cone1ag0305 820 FunFam receptor-like protein kinase FERONIA 485 597 - -
Cone1ag0305 820 Pfam Protein tyrosine and serine/threonine kinase 526 789 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag0305 820 Gene3D Transferase(Phosphotransferase) domain 1 598 818 - -
Cone1ag0305 820 CDD STKc_IRAK 527 793 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0305 Cone-Chr1:2291079 Cone6ag0119 Cone-Chr6:572346 4.34E-213 dispersed
Cone7ag0609 Cone-Chr7:2965178 Cone1ag0305 Cone-Chr1:2291079 3.25E-70 dispersed
Cone1ag0305 Cone-Chr1:2291079 Cone1ag0678 Cone-Chr1:6360381 1.29E-215 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82457 PF00657 Lipase_GDSL 5.60E-40 CL0264 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0305 - - - 0.0