Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0336 ATGGAAGCTAATAAGAAAGAGGAAGTGGTAGATGTACGGTCGGTCGTGGAAGCTGTGGCTTCGAATGACCAGGTTGATGCTCCAATTTACGAGGTTGAAAGCCTTTGCATGCGCTGTGGCGAAAATGGAGTAACAAGGTTTCTATTGACTTTCATTCCGCACTTTAGGAAGATTTTGCTGTCAGCCTTTGAATGTCCGCACTGCAGCGAGAGGAACAATGAAGTTCAGTTTGCCGGTGAGATTCAACCCCGTGGTTGTTGCTATCGTTTAGAGGTCCCTGTGGCAGATCAGAAGGTACTTAATCGACAAGTAGTGAAATCTGAGTCGGCCACCATCAAGATTCCTGATTTGGACTTCGAGATTCCCCCTGAAGCTCAGCGTGGAACGCTATCAACTGTATGGAATCGACCACAGGAGGAAAATGAAGGCAAGAATGACGGTCACCATCATATATTTCAATTGTTCTTGGTGGAAGGGATATTGGTACGAGCTGTGGAGGGGCTGGAAGCCCGTCAGGAGGAACGTCGGAAAGTGGATCCTCAGACTGCTGAAGCAATAGACCAGTTTTTGTTAAAATTAAGATCTTGTGCAAAAGGAGATTCATCTTTCACCTTCATCTTGGATGATCCTTCAGGAAACAGCTTCATTGAGAATCCATATGCTCCATCCTTGGACCCATCATTGAGTATTAAGTTCTATGACCGAACTCCAGAGCAACAAGCATCATTGGGGTATTCAATTGACTCGGCTCAGTTAGTTGAAGCTGGTGTTAGAACAGCAACAGCGGAAGGCCCTGGTCCTTCTTCTGATCAAGTTGGAGACCTGAATGGATCAATTGGAGCAGTAGCTGGTCATAGAGCGATTGCTCAGAGTAACAGTGAAGAAATTGCTGAAGCTTTGTTTCGTTACACTGCACCTGAAGAAGTGACGACATTCCCATCAACATGTGGGGCATGTGCTACCGGGTGTGAGACTCGAATGCTTGTCACCAATATTCCTTACTTCCAAGAAGTTATTGTGATGGCATCTACATGTGATTCCTGCGGGTACCGTAATTCAGAGTTGAAGCCTGGTCGGCGAATTCCTGATAATGGGAAGAGAATTACCCTTTATGTCAAGAACGTTAAGGATCTTGTCCGTGATGTGATTAAGTCAGATACTGCAAGTGTGAGAGTCCCTGAGCTCGAACTGGAGCTGGCTAGTGGTACTCTTGGGGGAGCTGTTACAACAGTTGAAGGTTTAATTACAAAAATTAGTGAAAGTCTTGAGAGAATTCATGGATTTACTTTTGGGGACAGTCTTGATGAAAATAAAAGAAGCAAGTGGCTAGACTTCAAAGCAAGGTTAAATAAGTTTTTAAGCTTGGAAGAGCCTTGGACATTAATTATTGACGATGCCTTGGCAAACTCATTTGTTGCACCAGTAACTGATGACATCAAGGACGATCAACAGATGACATTTGAAGAGTATGAAAGATCGTGGGAGCAAAATGAAGAATTGGGTCTGAATGATATTGACACTACTTCTGCCGATGCAGCTTATAATGATTCAACCGACGCAATAAAACAAGTTTGA 1575 44.0 MEANKKEEVVDVRSVVEAVASNDQVDAPIYEVESLCMRCGENGVTRFLLTFIPHFRKILLSAFECPHCSERNNEVQFAGEIQPRGCCYRLEVPVADQKVLNRQVVKSESATIKIPDLDFEIPPEAQRGTLSTVWNRPQEENEGKNDGHHHIFQLFLVEGILVRAVEGLEARQEERRKVDPQTAEAIDQFLLKLRSCAKGDSSFTFILDDPSGNSFIENPYAPSLDPSLSIKFYDRTPEQQASLGYSIDSAQLVEAGVRTATAEGPGPSSDQVGDLNGSIGAVAGHRAIAQSNSEEIAEALFRYTAPEEVTTFPSTCGACATGCETRMLVTNIPYFQEVIVMASTCDSCGYRNSELKPGRRIPDNGKRITLYVKNVKDLVRDVIKSDTASVRVPELELELASGTLGGAVTTVEGLITKISESLERIHGFTFGDSLDENKRSKWLDFKARLNKFLSLEEPWTLIIDDALANSFVAPVTDDIKDDQQMTFEEYERSWEQNEELGLNDIDTTSADAAYNDSTDAIKQV 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2635638 2644816 - Conep01aG0035600.1 Cone1ag0336 431027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0336 524 FunFam zinc finger protein ZPR1 80 245 - -
Cone1ag0336 524 PANTHER ZINC FINGER PROTEIN ZPR1 156 513 IPR040141 GO:0005634(PANTHER)|GO:0005737(PANTHER)
Cone1ag0336 524 FunFam Zinc finger protein ZPR1 360 502 - -
Cone1ag0336 524 Pfam ZPR1 zinc-finger domain 31 83 IPR004457 GO:0008270(InterPro)
Cone1ag0336 524 Pfam ZPR1 zinc-finger domain 308 362 IPR004457 GO:0008270(InterPro)
Cone1ag0336 524 NCBIfam ZPR1 zinc finger domain 315 506 IPR004457 GO:0008270(InterPro)
Cone1ag0336 524 Gene3D ZPR1, zinc finger domain 24 79 IPR042452 -
Cone1ag0336 524 Gene3D ZPR1, zinc finger domain 304 358 IPR042452 -
Cone1ag0336 524 FunFam Zinc finger protein ZPR1 305 359 - -
Cone1ag0336 524 FunFam Zinc finger protein ZPR1 24 79 - -
Cone1ag0336 524 Gene3D ZPR1, A/B domain 80 139 IPR042451 -
Cone1ag0336 524 Gene3D ZPR1, A/B domain 146 245 IPR042451 -
Cone1ag0336 524 Gene3D ZPR1, A/B domain 360 502 IPR042451 -
Cone1ag0336 524 Pfam ZPR1 jelly-roll domain 157 245 - -
Cone1ag0336 524 Pfam ZPR1 jelly-roll domain 376 502 - -
Cone1ag0336 524 Pfam ZPR1 jelly-roll domain 100 133 - -
Cone1ag0336 524 SMART zpr1 34 218 IPR004457 GO:0008270(InterPro)
Cone1ag0336 524 SMART zpr1 314 474 IPR004457 GO:0008270(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0336 Cone-Chr1:2635638 Cone5ag1495 Cone-Chr5:10094002 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0336 K06874 - rcu:8258732 774.622