Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0365 ATGAAGTACTACTCATCGGTTCTTGTCCTCTTAATTGTTGTCATTCTTCCACTAGTTTCAACCTCAGAAGATGGTGAGGAGGAGATTAGCCTATACGTTCCAAAGCTGAAGAAATTCTCACCTTTTGAGGACTCCCTCTCCTACACCTTTTATCACCAGAGCTGTCCTGAGGTTGAAGGCATTATTCACAGGAAGCTCAGAGAATGGCTTAACAAGGATTACACTCTTGCCGCCAGCTTAATTAGGCTCCACTTCCATGACTGCGCTGTTAGGGGATGTGATGCTTCAATTCTTCTAAATCACAAAGGAAGTGAGAGGAGAGCTCCGGTGAGCAAGACCTTGAGAGGGTACGAAGTGATCGACGACATAAAAACAGAGATAGAGAAAAGATGCCCGAAAACAGTATCATGTGCAGATATCTTAACAGCAGTTGCAAGAGACGCCATTGTTCTTGTCGGTGGTCCTTATTGGATGATCCCTTATGGAAGAAGAGATGGAACGATTTCCATTGCCAAGGAAACCCTGCAGGTTCCAATGGGTCATGAAAATATCACTTCTCTCATTGTGCATTTCCAGTCATGGGGTTTGAATGTTCTTGACCTGGTTGTTCTTTCAGGTGCTCATACTATTGGAAGGTGTAGCTGCGGTGTGATTCAAAACAGGCTGTTTAACTATTCCGGATCCGGGAAACCCGACCCGTCACTTGATCCGAAATACCTGAACTTTTTGAAGAGGAAATGCAGATGGGCCTCAGATTATGTGGATTTCGATCCTACGACCCCAAATAAATTCGACAATGAGTACTTTGATAATTTACCGAAGAAGATGGGCCTCTTGTCCACTGATTCATTGCTTTATGGTGATTCAAGGACAGCACCTATCGCCGAGGCCCTGTCTCACCAGCCCCGTGTCTTCTACCACCAGTTTGGGGTTTCCATGGCTAAACTTGGGAATGTTCAAGTTCTCACAGGCCCTTATGAAGGAGAGATTCGAACCCAATGTAGTTTTGTCAATGGCCAACGACGTTAA 1029 45.0 MKYYSSVLVLLIVVILPLVSTSEDGEEEISLYVPKLKKFSPFEDSLSYTFYHQSCPEVEGIIHRKLREWLNKDYTLAASLIRLHFHDCAVRGCDASILLNHKGSERRAPVSKTLRGYEVIDDIKTEIEKRCPKTVSCADILTAVARDAIVLVGGPYWMIPYGRRDGTISIAKETLQVPMGHENITSLIVHFQSWGLNVLDLVVLSGAHTIGRCSCGVIQNRLFNYSGSGKPDPSLDPKYLNFLKRKCRWASDYVDFDPTTPNKFDNEYFDNLPKKMGLLSTDSLLYGDSRTAPIAEALSHQPRVFYHQFGVSMAKLGNVQVLTGPYEGEIRTQCSFVNGQRR 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3039286 3040539 - Conep01aG0038500.1 Cone1ag0365 431056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0365 342 PRINTS Haem peroxidase superfamily signature 135 152 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0365 342 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0365 342 PRINTS Haem peroxidase superfamily signature 200 215 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0365 342 PRINTS Haem peroxidase superfamily signature 77 91 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0365 342 PRINTS Haem peroxidase superfamily signature 153 165 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0365 342 CDD secretory_peroxidase 46 337 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone1ag0365 342 FunFam Peroxidase 178 316 - -
Cone1ag0365 342 PANTHER PEROXIDASE 25-RELATED 31 334 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cone1ag0365 342 ProSitePatterns Peroxidases proximal heme-ligand signature. 200 210 IPR019793 -
Cone1ag0365 342 PRINTS Plant peroxidase signature 271 288 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0365 342 PRINTS Plant peroxidase signature 199 211 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0365 342 PRINTS Plant peroxidase signature 115 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0365 342 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0365 342 PRINTS Plant peroxidase signature 255 270 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0365 342 PRINTS Plant peroxidase signature 134 144 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0365 342 PRINTS Plant peroxidase signature 55 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0365 342 PRINTS Plant peroxidase signature 79 99 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0365 342 PRINTS Plant peroxidase signature 153 168 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0365 342 SUPERFAMILY Heme-dependent peroxidases 46 338 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0365 342 Gene3D Peroxidase, domain 2 178 316 - -
Cone1ag0365 342 Pfam Peroxidase 64 298 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0365 342 ProSitePatterns Peroxidases active site signature. 77 88 IPR019794 GO:0004601(InterPro)
Cone1ag0365 342 FunFam Peroxidase 49 190 - -
Cone1ag0365 342 Gene3D - 49 338 - -
Cone1ag0365 342 ProSiteProfiles Plant heme peroxidase family profile. 45 338 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1452 Cone-Chr10:11282388 Cone1ag0365 Cone-Chr1:3039286 3.29E-129 dispersed
Cone1ag0365 Cone-Chr1:3039286 Cone3ag1517 Cone-Chr3:33696351 5.79E-133 dispersed
Cone1ag0365 Cone-Chr1:3039286 Cone5ag1379 Cone-Chr5:8424671 6.47E-240 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0365 K00430 - csv:101208042 488.034