Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0382 ATGGATCTCTTACAGTCTCACAGGGCAGAGATGATAAGCATAAGTGTTGCTCTCGTTGCCATTGGCGTTGGCACTGCCTACTATTTTTATATCAACAAGAAACCCAGAGGTTGCTTGGAGCCTCAGAAATTCAAGGAATTTAAGCTTGTTAAGCGGACCCAACTCAGCCACAATGTGGCGAGGTTTAGATTTTCTCTTCCTACCCCGACCTCAGTGTTGGGGCTTCCTATTGGACAACATATAAGTTGCAAAGGAAATGATGGTCTTGGTGAAGAAGTTGTCAAACCCTATACCCCTACAACCTTGGATTCAGATGTCGGATACTTTGAATTAGTTATAAAGATGTACCCACAAGGACGAATGTCCCACCACTTCCGTGAGATGCGTGAAGGCGATTGCTTGGCTGTTAAAGGACCCAAGGGACGTTTCAAGTATCAACCTAACCAAGTGAGAGTCTTTGGGATGCTCGCTGGCGGCACAGGTATCACTCCCATGTTCCAGGTTGCAAGAGCTATATTGGAAAACCCAATTGACAAGACCAATTTATATCTCATATATGCTAATGTTACTTATGAAGACATTCTCTTGAAGGAAGAACTTGATGGTCTTGCTAGTACCTTTCCCAATCGCTTCACTGTCTATTATGTCCTCAATAAGCCTCCAGAAGAATGGGATGGTGGTGTCGGGTTCGTAACGAAGGAAATGATTCAAGAACACTGTCCTGCACCAGCCCCTGATATTCAGATTTTAAGGTGCGGACCACCTCCCATGAACAAGGCCATGGCTGCTCACCTAGAAAACCTGGGATACAGCCCACAAATGCTGTTCCAGTTTTAA 837 44.92 MDLLQSHRAEMISISVALVAIGVGTAYYFYINKKPRGCLEPQKFKEFKLVKRTQLSHNVARFRFSLPTPTSVLGLPIGQHISCKGNDGLGEEVVKPYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMREGDCLAVKGPKGRFKYQPNQVRVFGMLAGGTGITPMFQVARAILENPIDKTNLYLIYANVTYEDILLKEELDGLASTFPNRFTVYYVLNKPPEEWDGGVGFVTKEMIQEHCPAPAPDIQILRCGPPPMNKAMAAHLENLGYSPQMLFQF 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3268924 3276750 + Conep01aG0040200.1 Cone1ag0382 431073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0382 278 FunFam NADH-cytochrome b5 reductase 136 278 - -
Cone1ag0382 278 CDD cyt_b5_reduct_like 47 278 - -
Cone1ag0382 278 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 134 274 IPR039261 -
Cone1ag0382 278 PANTHER NADH-CYTOCHROME B5 REDUCTASE 7 278 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
Cone1ag0382 278 Pfam Oxidoreductase NAD-binding domain 155 261 IPR001433 GO:0016491(InterPro)
Cone1ag0382 278 PRINTS Cytochrome B5 reductase signature 192 203 - -
Cone1ag0382 278 PRINTS Cytochrome B5 reductase signature 154 173 - -
Cone1ag0382 278 PRINTS Cytochrome B5 reductase signature 95 102 - -
Cone1ag0382 278 PRINTS Cytochrome B5 reductase signature 73 84 - -
Cone1ag0382 278 PRINTS Cytochrome B5 reductase signature 131 145 - -
Cone1ag0382 278 PRINTS Cytochrome B5 reductase signature 248 256 - -
Cone1ag0382 278 Gene3D - 135 278 IPR039261 -
Cone1ag0382 278 Gene3D Translation factors 37 134 - -
Cone1ag0382 278 Pfam Oxidoreductase FAD-binding domain 47 145 IPR008333 -
Cone1ag0382 278 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 192 203 IPR001709 GO:0016491(InterPro)
Cone1ag0382 278 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 154 173 IPR001709 GO:0016491(InterPro)
Cone1ag0382 278 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 248 256 IPR001709 GO:0016491(InterPro)
Cone1ag0382 278 SUPERFAMILY Riboflavin synthase domain-like 38 148 IPR017938 -
Cone1ag0382 278 FunFam NADH-cytochrome b5 reductase 37 136 - -
Cone1ag0382 278 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 42 146 IPR017927 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0786 Cone-Chr16:8726054 Cone1ag0382 Cone-Chr1:3268924 8.13E-67 dispersed
Cone1ag0382 Cone-Chr1:3268924 Cone3ag0519 Cone-Chr3:2561974 3.58E-155 dispersed
Cone20ag0466 Cone-Chr20:2440144 Cone1ag0382 Cone-Chr1:3268924 8.21E-49 transposed
Cone1ag0382 Cone-Chr1:3268924 Cone5ag1478 Cone-Chr5:9871340 9.91E-198 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0382 K00326 - rcu:8289547 489.189