Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0415 ATGGCTTTGTTGCTGTTGTGCTCAGCCACGAGGTCACAGTTAAGCACAGATTTCTACATGCAAACATGCCCAAATGTCCTCAAAATTGTGCGCAGTGAAGTTCAGAAAGCTATCATGAACGAAATGCGAATGGCTGCCTCTTTGCTTCGACTTCACTTCCACGATTGCTTTGTGTTGGGATGCGAGGGTTCGGTTCTATTGGATGGAAGTGATAATGAGAAGTTTGCCGGACCTAACTTGAACTCAGCAAGAGGTTTCGAAGTTGTAGATGCCATCAAAAGCGCAGTGGAGAGTGCTTGTAGTGGTGTTGTGTCTTGTGCTGACATACTGGCCATTGCTGCTCGAGATTCTGTCCTCTTGAGTGGGGGACCTACGTGGAAGGTTCAATTGGGTAGAAGAGACGGACTACTTGCAAACCAAACATTAGCGAATGAGGCTCTACCCTCACCATTTGACACCGTTGATCAGATTTTGACCAAATTTATCAACGTGGGCCTCAATATCAGCGACATGGTTTCCTTGTCAGGTGCGCATACAATTGGATTAGCGAGGTGTGTGACATTCGACAACAGATTATTCGACTTCAATTCAACTGCGTCACCGGACACGACAATGGATGCGAGTATGATATCTGATCTGCAAACCCTTTGCCCTCAGAATGGCGACGGAAACACGACAACGTCTCTTGATAGAAATTCCACGGATCTATTTGACAATCATTACTTCAAAAACTTGCTAATTGGAAAGGGTCTTCTTGGGTCAGACCAAGTGCTGTTTTCAAGTGACGAGGCTAATGCTACAATAACCAAAAGTATAGTCCAGGTCTATAGCTCAAATACTTTCATGTTCTTCAACGACTTCGCTAATTCTATGATTAAGATGGGGAATACAAATGTTCTCACCGGGTCAGCTGGAGAGATTCGGAAGAATTGCAGAGTTGTTAATTAG 948 44.51 MALLLLCSATRSQLSTDFYMQTCPNVLKIVRSEVQKAIMNEMRMAASLLRLHFHDCFVLGCEGSVLLDGSDNEKFAGPNLNSARGFEVVDAIKSAVESACSGVVSCADILAIAARDSVLLSGGPTWKVQLGRRDGLLANQTLANEALPSPFDTVDQILTKFINVGLNISDMVSLSGAHTIGLARCVTFDNRLFDFNSTASPDTTMDASMISDLQTLCPQNGDGNTTTSLDRNSTDLFDNHYFKNLLIGKGLLGSDQVLFSSDEANATITKSIVQVYSSNTFMFFNDFANSMIKMGNTNVLTGSAGEIRKNCRVVN 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3631426 3634326 + Conep01aG0043500.1 Cone1ag0415 431106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0415 315 PRINTS Plant peroxidase signature 122 137 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0415 315 PRINTS Plant peroxidase signature 23 42 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0415 315 PRINTS Plant peroxidase signature 84 97 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0415 315 PRINTS Plant peroxidase signature 228 243 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0415 315 PRINTS Plant peroxidase signature 289 302 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0415 315 PRINTS Plant peroxidase signature 103 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0415 315 PRINTS Plant peroxidase signature 47 67 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0415 315 PRINTS Plant peroxidase signature 169 181 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0415 315 PRINTS Plant peroxidase signature 244 261 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0415 315 FunFam Peroxidase 148 294 - -
Cone1ag0415 315 SUPERFAMILY Heme-dependent peroxidases 13 315 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0415 315 Gene3D Peroxidase, domain 2 148 294 - -
Cone1ag0415 315 Pfam Peroxidase 30 277 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0415 315 Gene3D - 18 315 - -
Cone1ag0415 315 ProSitePatterns Peroxidases proximal heme-ligand signature. 170 180 IPR019793 -
Cone1ag0415 315 CDD secretory_peroxidase 13 314 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone1ag0415 315 PRINTS Haem peroxidase superfamily signature 45 59 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0415 315 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0415 315 PRINTS Haem peroxidase superfamily signature 122 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0415 315 PRINTS Haem peroxidase superfamily signature 104 121 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0415 315 PRINTS Haem peroxidase superfamily signature 170 185 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0415 315 ProSiteProfiles Plant heme peroxidase family profile. 13 315 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag0415 315 FunFam Peroxidase 17 160 - -
Cone1ag0415 315 ProSitePatterns Peroxidases active site signature. 45 56 IPR019794 GO:0004601(InterPro)
Cone1ag0415 315 PANTHER PEROXIDASE 72-RELATED 5 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0477 Cone-Chr19:3919418 Cone1ag0415 Cone-Chr1:3631426 8.63E-108 dispersed
Cone1ag0415 Cone-Chr1:3631426 Cone5ag0153 Cone-Chr5:650032 1.06E-100 dispersed
Cone7ag1849 Cone-Chr7:11981829 Cone1ag0415 Cone-Chr1:3631426 9.63E-51 dispersed
Cone1ag0415 Cone-Chr1:3631426 Cone13ag0525 Cone-Chr13:5541151 7.86E-61 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0415 K00430 - gmx:100787073 474.552