Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0445 ATGTCAGCTGCCGCAAAGCATCTAACCCCGGTTAGTCTTGAGTTAGGCGGAAAATGCCCGGCTGTTGTTGATTCCCTTTCAAATTCTTGGGAACTAGAGGCCGCTGCTAAACAAATTATCGTAGCAAAATACGGAGCATGTTCGGGTCAAGTATGCATAGGAGTTGATTATATACTTGCTGACAAGAAATTTCTTAACACCTTGGTGGAAACAATGAAGGATTTGATAAAGAAGATGTTCGGAGTAAATCCTAAAGAATCAAACAGTATAGCAAGAATAATAAACAAACAACATTTCATGAGATTGAAGGGTCTAGTACATGATACAACGGTGCAAAATTCTTTTGCTTATGGAGGTTCAATGGAGGAAGACGAACTGTTTATTGAGCCTACAATATTGGTTGATCCTCCACTTGATGCAGAAATAATGACAGAAGAAATATTTGGCCCATTTCTTCCAAAAATTGGGATGAGAACCGTGGAACTTGTAGAAGCTGCTTACAATTACGATTACCTTCAAATGGCTCTCATTATTCTTGGCTTGAACAGCTCTTAA 555 38.92 MSAAAKHLTPVSLELGGKCPAVVDSLSNSWELEAAAKQIIVAKYGACSGQVCIGVDYILADKKFLNTLVETMKDLIKKMFGVNPKESNSIARIINKQHFMRLKGLVHDTTVQNSFAYGGSMEEDELFIEPTILVDPPLDAEIMTEEIFGPFLPKIGMRTVELVEAAYNYDYLQMALIILGLNSS 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4025165 4026334 - Conep01aG0046500.1 Cone1ag0445 431136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0445 184 Pfam Aldehyde dehydrogenase family 1 161 IPR015590 GO:0016491(InterPro)
Cone1ag0445 184 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 16 IPR016162 GO:0016491(InterPro)
Cone1ag0445 184 PANTHER ALDEHYDE DEHYDROGENASE 1 161 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(InterPro)|GO:0006081(PANTHER)
Cone1ag0445 184 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 17 165 IPR016163 GO:0016620(InterPro)
Cone1ag0445 184 SUPERFAMILY ALDH-like 1 165 IPR016161 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0445 Cone-Chr1:4025165 Cone6ag1661 Cone-Chr6:12657126 3.21E-59 dispersed
Cone1ag0445 Cone-Chr1:4025165 Cone5ag1440 Cone-Chr5:9257318 6.38E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0445 K00128 - cit:102624275 224.942