Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag0502 | ATGGGTCAGATCCAGTACTCCGAGAAGTATTTCGATGACACTTATGAGTATAGGCACGTCGTACTTCCTCCCGAAGTAGCAAAGCTTCTTCCCAAGAATCGCCTCCTCTCTGAAAATGAATGGCGGGCCATCGGAGTCCAGCAGAGTCGTGGGTGGGTCCACTATGCGATTCACCGTCCAGAGCCACACATAATGCTGTTCAGGAGACCTCTGAATTACCAGCAGCAGCAAGAGACCCAACAACAACAACAAGCTCAGCAACAAAACGTCCTTGCTAAGTGA | 282 | 50.0 | MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQETQQQQQAQQQNVLAK | 93 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 4879589 | 4881547 | - | Conep01aG0052400.1 | Cone1ag0502 | 431193 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag0502 | 93 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 3 | 17 | IPR000789 | GO:0016538(InterPro) | |
Cone1ag0502 | 93 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 55 | 69 | IPR000789 | GO:0016538(InterPro) | |
Cone1ag0502 | 93 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 18 | 32 | IPR000789 | GO:0016538(InterPro) | |
Cone1ag0502 | 93 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 40 | 54 | IPR000789 | GO:0016538(InterPro) | |
Cone1ag0502 | 93 | SUPERFAMILY | Cell cycle regulatory proteins | 1 | 83 | IPR036858 | GO:0016538(InterPro) | |
Cone1ag0502 | 93 | Pfam | Cyclin-dependent kinase regulatory subunit | 4 | 70 | IPR000789 | GO:0016538(InterPro) | |
Cone1ag0502 | 93 | ProSitePatterns | Cyclin-dependent kinases regulatory subunits signature 1. | 6 | 24 | IPR000789 | GO:0016538(InterPro) | |
Cone1ag0502 | 93 | SMART | CKS_2 | 3 | 72 | IPR000789 | GO:0016538(InterPro) | |
Cone1ag0502 | 93 | PANTHER | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 | 3 | 90 | - | GO:0000307(PANTHER)|GO:0007346(PANTHER)|GO:0019005(PANTHER)|GO:0019901(PANTHER)|GO:0042393(PANTHER)|GO:0043130(PANTHER)|GO:0061575(PANTHER) | |
Cone1ag0502 | 93 | FunFam | Cyclin-dependent kinases regulatory subunit | 1 | 87 | - | - | |
Cone1ag0502 | 93 | Gene3D | - | 1 | 86 | IPR036858 | GO:0016538(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag0502 | Cone-Chr1:4879589 | Cone11ag1331 | Cone-Chr11:9780307 | 5.59E-54 | wgd | |
Cone1ag0502 | Cone-Chr1:4879589 | Cone18ag0244 | Cone-Chr18:1200438 | 5.59E-54 | wgd | |
Cone1ag0502 | Cone-Chr1:4879589 | Cone5ag1270 | Cone-Chr5:6065625 | 5.63E-18 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag0502 | K02219 | - | gmx:547737 | 159.073 |