Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0583 ATGGCGGCACCATTATCCGTATCTTCATTCTTCAACAAATTCCTCTCTCTCCTCCTCCATCTTGGCTGCTTCATCTTCACCACCTCCAACACCGGCTCCCACCGCCACCGTGAAACTCCTCCGCCTTCTAAAAAGCGCAAGGGTCTGATCAACTCCTCCTGGTCCTATCTCAAACGTATCTTCTCTTCCAAAACCTGCAAATCTGCCATCCAAACCGGTCCATCCACCCCGGCCCGATCCTCTCAGCATTCAGGCTCCAGCCTGAACCTTATCCCATCAGGATCCTGCCCCGAGTCCGAAATCTCAACTCAACACACATTCTTTCCCCTCCGCAACGATATCTTCCCCTGCACATTTTGCGGCGAGATTTTCCAGAAACCGCAGTTCCTCGAGAATCACCAGGCGATTAAACACGCCGTATCGGAGCTCCTAGACGGCGATTCGGGCAAGAACATAGTCCGGATCATATTCCAATCGGGCTGGAGTCCAAGCAACAAATCCAAACAACCGAAAATCAATCGGATCCTGAAAATCCATTGCTGCTCTAAGATATTGACCAGGTTCGAGGAGTACAGGGAATCGGTGAAAGCCAAAGCTGCTGCTCGGAACAGCATCGTAAGTAGACGGAACGAGAGGTGCGTAGCGGACGGGAACGAGCTTCTGAGATTCCACTGCTCGACTTTTCTCTGTGATTTGGGACTTGATGGAAATTCGAGTATTTGTTCGCATCAATTCTGTAATATTTGCGGGATCATCAAGTCCGGATTCTCACCCAAGTTGGACGGGATTTCCACGCTGTCGAATAGCTGGAGGGCACACGCGGCGGTTCCAGAAGAGATGGAGGAGGAGTTCAAGTTCATGAACGTGAAGAGGGCGATGCTGGTGTGCCGGGTGGTGGCTGGTCGGGTCGGATGCGATGGTGACGAAGATGGGTTTGACAAGGAGGGTGGTGGGTTTGACTCGATCGTGGGAAGAAGTGAACATGATGATGGGGCCCGGATGAAGATGGACGAAGAGGAGCTGTTGGTTTTCAATCCTAAGGCTGTGCTTCCTTGCTTTGTGATTGTGTACACTCTTTGA 1080 51.48 MAAPLSVSSFFNKFLSLLLHLGCFIFTTSNTGSHRHRETPPPSKKRKGLINSSWSYLKRIFSSKTCKSAIQTGPSTPARSSQHSGSSLNLIPSGSCPESEISTQHTFFPLRNDIFPCTFCGEIFQKPQFLENHQAIKHAVSELLDGDSGKNIVRIIFQSGWSPSNKSKQPKINRILKIHCCSKILTRFEEYRESVKAKAAARNSIVSRRNERCVADGNELLRFHCSTFLCDLGLDGNSSICSHQFCNICGIIKSGFSPKLDGISTLSNSWRAHAAVPEEMEEEFKFMNVKRAMLVCRVVAGRVGCDGDEDGFDKEGGGFDSIVGRSEHDDGARMKMDEEELLVFNPKAVLPCFVIVYTL 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5847229 5848774 - Conep01aG0060700.1 Cone1ag0583 431274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0583 359 MobiDBLite consensus disorder prediction 69 90 - -
Cone1ag0583 359 ProSitePatterns Zinc finger C2H2 type domain signature. 117 138 IPR013087 -
Cone1ag0583 359 ProSiteProfiles Zinc finger C2H2 type domain profile. 115 143 IPR013087 -
Cone1ag0583 359 Gene3D - 145 358 - -
Cone1ag0583 359 SUPERFAMILY ADP-ribosylation 140 358 - -
Cone1ag0583 359 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 52 357 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0583 Cone-Chr1:5847229 Cone4ag1379 Cone-Chr4:11178786 5.69E-62 dispersed
Cone1ag0583 Cone-Chr1:5847229 Cone5ag1093 Cone-Chr5:4864741 3.23E-230 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45447 PF00069 Pkinase 1.10E-50 CL0016 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0583 - - - 0.0