Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone1ag0585 | ATGGAACTCCTCCCTCTCCTCTTCACCATCACATCTGCCACTTCAGCTTACCTCTTGTGGTTCTACTTTCTCTCCAAAAAACTCACCGGCCCAAAAGTATGGCCGTTAGTCGGAAGCCTACCGGTCCTATTCTTAAACCGGTCTCGAATGCACGATTGGATGGTCGAGAACCTCCGCTCAACTGGCGGCGCTGCCACTTACCAAACGTGTACTATCGCTCTTCCGTTTGTAGCGCGCAAACAAGGCTTCTTTACCGTTACCTGCCACCCGAAAAACATTGAACACATTCTCCGTACGAGGTTCGATAACTACCCAAAGGGGCCCACGTGGCAACAGGCATTTCATGATCTCTTGGGTCAGGGGATATTCAACAGCGACGGTGAAACGTGGTTGATTCAACGCAAAACCGCCGCGTTAGAGTTCACAACTAGAACTCTACGTCAAGCTATGGCACGGTGGGTAAACAGAACGATCAAGACGCGCTTGTGGCGTATTTTAGACAACGCTGTTGAGAACAAAACGACCGTGGATTTGCAGGATCTGTTGCTGCGTTTGACATTCGATAATATATGCGGACTGACGTTTGGAAAAGACCCCGAAACGCTGTCGCCTGATTCGCCGGAAAATCCGTTTTCTGTCGCGTTTGACACCGCGACTGAAGCGACCATGCAGCGGTTTATATATCCCACGTTTTTCTGGAGGTTGCAGAAGCTAATGGGCATTGGCGCTGAAAAGAGGTTAAAGAAAAGCCTCGAAGTCGTGGATAATTACATGAACGATGCCATCTCCGTACGGAAAGAATCTCCGTCCGACGATCTGTTATCTCGTTTCCTGAAGAAACGAGACGTTAACGGAAACCTGTTTCCGACGTCAATTCTTCAGCACATTGCTTTGAACTTCGTCCTAGCTGGACGCGACACGTCGTCTGTGGCGCTGAGCTGGTTTTTCTGGCTAGTCATGAATCATAAATCAGTAGAGGAGAAGATCGTGAACGAAATATCGACAGTTCTGAAAGTGACACGTGGCGAAGTCAGCGGAAAATGGGTGGAAGAGCCGTTGACGTTTGACGAGGCGGATCAGTTGGTTTATCTGAAAGCTGCCTTGGCCGAAACGCTGCGTCTGTACCCTTCTGTGCCGGAGGATTTCAAGTACGTTGTATCGGACGATACTTTGCCCGACGGGACGTTTGTACCTGCCGGTTCGACCGTGACGTATTCGATATATTCGGTGGGGAGGATGAAGAGCGTATGGGGGGAGGACTGCATGGAGTTTAAACCGGAGAGATGGTTATCGGTCCAGGGAGACCGGTTCGAACCGCCAAAAGATGGGTACAAGTTTGTCGCTTTTAATGCCGGTCCGAGGACTTGTTTGGGGAAGGATTTGGCATACCTTCAAATGAAATCCGTGGCTTCCGCTGTGCTTCTGCGTTACCGACTGTTGCCGGTTCCCAGTCACCGGGTGGAGCAGAAAATGTCTCTCACGCTGTTCATGAAGAATGGGCTTCAGGTCTATCTGCATCCGCGTAATCTTGGAACTCTGTGA | 1542 | 50.19 | MELLPLLFTITSATSAYLLWFYFLSKKLTGPKVWPLVGSLPVLFLNRSRMHDWMVENLRSTGGAATYQTCTIALPFVARKQGFFTVTCHPKNIEHILRTRFDNYPKGPTWQQAFHDLLGQGIFNSDGETWLIQRKTAALEFTTRTLRQAMARWVNRTIKTRLWRILDNAVENKTTVDLQDLLLRLTFDNICGLTFGKDPETLSPDSPENPFSVAFDTATEATMQRFIYPTFFWRLQKLMGIGAEKRLKKSLEVVDNYMNDAISVRKESPSDDLLSRFLKKRDVNGNLFPTSILQHIALNFVLAGRDTSSVALSWFFWLVMNHKSVEEKIVNEISTVLKVTRGEVSGKWVEEPLTFDEADQLVYLKAALAETLRLYPSVPEDFKYVVSDDTLPDGTFVPAGSTVTYSIYSVGRMKSVWGEDCMEFKPERWLSVQGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLLPVPSHRVEQKMSLTLFMKNGLQVYLHPRNLGTL | 513 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 5854590 | 5856131 | - | Conep01aG0060900.1 | Cone1ag0585 | 431276 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone1ag0585 | 513 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 449 | 458 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone1ag0585 | 513 | Pfam | Cytochrome P450 | 84 | 497 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0585 | 513 | PRINTS | P450 superfamily signature | 456 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0585 | 513 | PRINTS | P450 superfamily signature | 447 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0585 | 513 | PRINTS | P450 superfamily signature | 303 | 320 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0585 | 513 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0585 | 513 | FunFam | Cytochrome P450 | 22 | 511 | - | - | |
| Cone1ag0585 | 513 | SUPERFAMILY | Cytochrome P450 | 20 | 508 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0585 | 513 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0585 | 513 | PRINTS | E-class P450 group I signature | 446 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0585 | 513 | PRINTS | E-class P450 group I signature | 26 | 45 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0585 | 513 | PRINTS | E-class P450 group I signature | 292 | 309 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0585 | 513 | PRINTS | E-class P450 group I signature | 456 | 479 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0585 | 513 | PRINTS | E-class P450 group I signature | 312 | 338 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0585 | 513 | CDD | CYP86A | 70 | 501 | - | - | |
| Cone1ag0585 | 513 | PANTHER | CYTOCHROME P450 | 20 | 501 | - | - | |
| Cone1ag0585 | 513 | Gene3D | Cytochrome P450 | 24 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone12ag0301 | Cone-Chr12:1644993 | Cone1ag0585 | Cone-Chr1:5854590 | 8.77E-242 | dispersed | |
| Cone14ag0365 | Cone-Chr14:1691857 | Cone1ag0585 | Cone-Chr1:5854590 | 6.92E-235 | dispersed | |
| Cone15ag0402 | Cone-Chr15:1882916 | Cone1ag0585 | Cone-Chr1:5854590 | 2.68E-238 | dispersed | |
| Cone1ag0585 | Cone-Chr1:5854590 | Cone8ag0297 | Cone-Chr8:1714016 | 1.87E-235 | dispersed | |
| Cone1ag0585 | Cone-Chr1:5854590 | Cone4ag1015 | Cone-Chr4:8861130 | 3.64e-313 | wgd | |
| Cone1ag0585 | Cone-Chr1:5854590 | Cone5ag1095 | Cone-Chr5:4872207 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone1ag0585 | K15401 | - | vvi:100243236 | 879.396 |