Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone1ag0625 | ATGGGATGGCCTTACATTGGAGAGACCCTTAAGCTCTACACTGAAAACCCAAATTCCTTCTTTTTCAATAGGCAGATGAGATATGGCGATGTATTTAAGACCCATATACTGGGGTGTCCTTGTGTGATGATGTCAAGCCCAGAAGCAGCAAGACTTGTTCTAGTAAGCCATGCCCATCTTTTCAAGCCAACATATCCAGCAAGCAAAGAGAAAATTATAGGACCAGAAGCTATCTTCTTTCAAAAAGGTGCATATCATTCAAGCCTCAAGAAGCTGATTCAAGCTTCATTTTCGCCTTCTTCAATCAGAAGCTCTCTCTCAGAGATTGAGCAAACTGCGCTCAAACTGCTTTCCACTTGGAACAACACCAGCATCAATACCTTGCATCAGATGAAGAAGTATGCTTTTGACGTGGCTATGTTATCGGCTTTCTGCGAGAATGGCGGGTTACGGGAAATAGAAGGAATTAAACAGCTCTATCAATGTCTTGAGAAGGGCTACAATTCTATGCCTTTAAATCTACCGGGAACTCCTTTTCACAAAGCAATGAAGGCAAGGAAGCGTTTGAATGAGAGCTTGAGGAAATTAATAGAAAAGAGAAGGCAAAGCAAGGAACAAGATGGGGGCTTATTGGGAGTGTTATTAGGGGCTGATCTAACTGATTCTCAGATTGCTGATAATATAATAGGCGTGATCTTTGCTGCTCATGACACTACTGCTAGTGCCCTAACATGGGTCATCAAGTATTTACACGACCACTCAGATGTCCTTGAAGCTGTAACGGTCAAATGCTTTCAGAAGGAACAAGAAGGAATACTTCAACGCAAAGCAGCAGAGAATCGTGGGTTGACTTGGGAGGATACAAGGCAAATGCCAATAACTAGCAGGGTGATTCAAGAAACGTTAAGAACAGCAAGCATATTGTCATTTACATTCAGAGAAGCTGTTCAAGATGTTGAGTTTGAAGGTTACATCATCCCTAGAGGCTGGAAAGTTCTTCCTCTCTTCAGAATCATCCATCACTCTGAAGAGTTCTTCCCTCAACCCAATAAATTCGACCCTTCAAGATTTGAGGTCCCACCAAGACCGAACACATACATTCCATTTGGGAATGGGGTGCACTCATGTCCGGGAAGTGAATTAGCCAAGCTTGAGATGCTCATCCTCCTCCATCACCTCACTACCACTTACAGGTCAGTCTCACTCTTCTCTCTCACATCAGGCAAACAAAGTAACAAATTCTAA | 1245 | 42.81 | MGWPYIGETLKLYTENPNSFFFNRQMRYGDVFKTHILGCPCVMMSSPEAARLVLVSHAHLFKPTYPASKEKIIGPEAIFFQKGAYHSSLKKLIQASFSPSSIRSSLSEIEQTALKLLSTWNNTSINTLHQMKKYAFDVAMLSAFCENGGLREIEGIKQLYQCLEKGYNSMPLNLPGTPFHKAMKARKRLNESLRKLIEKRRQSKEQDGGLLGVLLGADLTDSQIADNIIGVIFAAHDTTASALTWVIKYLHDHSDVLEAVTVKCFQKEQEGILQRKAAENRGLTWEDTRQMPITSRVIQETLRTASILSFTFREAVQDVEFEGYIIPRGWKVLPLFRIIHHSEEFFPQPNKFDPSRFEVPPRPNTYIPFGNGVHSCPGSELAKLEMLILLHHLTTTYRSVSLFSLTSGKQSNKF | 414 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 6077184 | 6079110 | + | Conep01aG0065100.1 | Cone1ag0625 | 431316 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone1ag0625 | 414 | PRINTS | P450 superfamily signature | 367 | 376 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0625 | 414 | PRINTS | P450 superfamily signature | 234 | 251 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0625 | 414 | PRINTS | P450 superfamily signature | 376 | 387 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0625 | 414 | PRINTS | P450 superfamily signature | 296 | 307 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0625 | 414 | Pfam | Cytochrome P450 | 3 | 397 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0625 | 414 | SUPERFAMILY | Cytochrome P450 | 2 | 398 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0625 | 414 | PRINTS | E-class P450 group I signature | 295 | 313 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0625 | 414 | PRINTS | E-class P450 group I signature | 376 | 399 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0625 | 414 | PRINTS | E-class P450 group I signature | 335 | 359 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0625 | 414 | PRINTS | E-class P450 group I signature | 25 | 44 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0625 | 414 | PRINTS | E-class P450 group I signature | 223 | 240 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0625 | 414 | PRINTS | E-class P450 group I signature | 366 | 376 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0625 | 414 | Gene3D | Cytochrome P450 | 1 | 410 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0625 | 414 | PANTHER | CYTOCHROME P450 26 | 1 | 397 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Cone1ag0625 | 414 | Coils | Coil | 179 | 206 | - | - | |
| Cone1ag0625 | 414 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 369 | 378 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone1ag0625 | Cone-Chr1:6077184 | Cone9ag0347 | Cone-Chr9:1528409 | 8.87E-181 | dispersed | |
| Cone1ag0625 | Cone-Chr1:6077184 | Cone4ag1045 | Cone-Chr4:9101115 | 2.34E-203 | wgd | |
| Cone1ag0625 | Cone-Chr1:6077184 | Cone7ag1082 | Cone-Chr7:8217629 | 9.17E-215 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone1ag0625 | K09843 | - | cit:102627021 | 628.246 |