Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag0645 | ATGGCAGAAGCTGATGATATTCAGCCACTTGTCTGTGATAATGGAACTGGAATGGTCAAGGCTGGGTTTGCTGGAGATGATGCTCCAAGAGCTGTTTTCCCCAGCATTGTGGGTCGCCCACGTCACACGGGGGTAATGGTTGGCATGGGTCAGAAAGATGCATATGTCGGTGATGAAGCTCAGTCCAAGCGTGGTATATTGACTTTGAAGTACCCCATTGAGCATGGAATTGTGAGCAATTGGGATGACATGGAGAAAATCTGGCATCACACCTTCTACAATGAACTCCGTGTGTCCCCCGAAGAACACCCTGTTCTACTCACTGAAGCACCTCTTAACCCAAAGGCTAACCGTGAAAAGATGACCCAGATCATGTTTGAGACTTTCAACACTCCTGCTATGTACGTTGCCATCCAGGCTGTTCTTTCCCTCTACGCCAGTGGACGCACAACTGGTATTGTTTTGGACTCAGGAGATGGTGTCAGCCACACTGTCCCCATTTATGAGGGGTATGCCCTCCCCCATGCTATACTTCGGCTTGACCTTGCAGGCCGTGACCTCACCGATGCCCTTATGAAAATCCTGACCGAGCGTGGCTATTCCTTTACCACCACTGCTGAGCGTGAAATTGTAAGAGACATGAAGGAGAAGCTTGCATATATCGCTCTTGATTATGAGCAAGAACTTGAAACTTCTAAGACTAGCTCTGCTGTTGAGAAAAGCTATGAATTGCCCGATGGGCAGGTAATTACTATTGGTGCTGAGCGATTCCGTTGTCCGGAAGTTCTTTTCCAGCCATCCATGATCGGAATGGAAGCTGCTGGTATTCATGAAACGACTTACAATTCTATCATGAAGTGCGATGTTGATATTAGGAAGGATTTGTATGGAAACATTGTTCTTAGTGGTGGATCTACCATGTTCACGGGCATTGGTGACAGAATGAGCAAGGAAATTACTGCTTTGGCCCCTAGCAGCATGAAAATTAAGGTGGTGGCCCCACCCGAGAGAAAGTACAGTGTCTGGATTGGTGGGTCTATCTTGGCATCTCTCAGCACTTTCCAGCAGATGTGGATTGCGAAAGCAGAGTATGATGAGTCAGGTCCATCAATTGTGCATAGGAAATGCTTTTGA | 1134 | 47.27 | MAEADDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVSPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFTGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF | 377 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 6178565 | 6180234 | - | Conep01aG0067300.1 | Cone1ag0645 | 431336 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag0645 | 377 | FunFam | Actin, muscle | 182 | 273 | - | - | |
Cone1ag0645 | 377 | SUPERFAMILY | Actin-like ATPase domain | 149 | 377 | IPR043129 | - | |
Cone1ag0645 | 377 | FunFam | Actin, alpha skeletal muscle | 3 | 178 | - | - | |
Cone1ag0645 | 377 | ProSitePatterns | Actins and actin-related proteins signature. | 106 | 118 | IPR020902 | - | |
Cone1ag0645 | 377 | SUPERFAMILY | Actin-like ATPase domain | 5 | 155 | IPR043129 | - | |
Cone1ag0645 | 377 | CDD | NBD_sugar-kinase_HSP70_actin | 10 | 183 | - | - | |
Cone1ag0645 | 377 | PRINTS | Actin signature | 51 | 62 | IPR004000 | - | |
Cone1ag0645 | 377 | PRINTS | Actin signature | 238 | 254 | IPR004000 | - | |
Cone1ag0645 | 377 | PRINTS | Actin signature | 63 | 85 | IPR004000 | - | |
Cone1ag0645 | 377 | PRINTS | Actin signature | 142 | 161 | IPR004000 | - | |
Cone1ag0645 | 377 | PRINTS | Actin signature | 28 | 37 | IPR004000 | - | |
Cone1ag0645 | 377 | PRINTS | Actin signature | 117 | 130 | IPR004000 | - | |
Cone1ag0645 | 377 | FunFam | Actin, alpha skeletal muscle | 255 | 329 | - | - | |
Cone1ag0645 | 377 | FunFam | Actin, alpha skeletal muscle | 330 | 377 | - | - | |
Cone1ag0645 | 377 | Gene3D | Actin; Chain A, domain 4 | 182 | 273 | - | - | |
Cone1ag0645 | 377 | SMART | actin_3 | 7 | 377 | IPR004000 | - | |
Cone1ag0645 | 377 | Gene3D | - | 140 | 340 | - | - | |
Cone1ag0645 | 377 | ProSitePatterns | Actins signature 1. | 55 | 65 | IPR004001 | - | |
Cone1ag0645 | 377 | Pfam | Actin | 5 | 377 | IPR004000 | - | |
Cone1ag0645 | 377 | FunFam | Actin, alpha skeletal muscle | 36 | 73 | - | - | |
Cone1ag0645 | 377 | PANTHER | ACTIN | 8 | 369 | IPR004000 | GO:0005737(PANTHER) | |
Cone1ag0645 | 377 | Gene3D | - | 10 | 371 | - | - | |
Cone1ag0645 | 377 | ProSitePatterns | Actins signature 2. | 358 | 366 | IPR004001 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0078 | Cone-Chr10:447368 | Cone1ag0645 | Cone-Chr1:6178565 | 3.18E-37 | dispersed | |
Cone13ag0532 | Cone-Chr13:5595558 | Cone1ag0645 | Cone-Chr1:6178565 | 3.55E-275 | dispersed | |
Cone1ag0645 | Cone-Chr1:6178565 | Cone3ag0092 | Cone-Chr3:533119 | 1.19E-273 | dispersed | |
Cone1ag0645 | Cone-Chr1:6178565 | Cone1ag1283 | Cone-Chr1:56236946 | 1.55E-269 | wgd | |
Cone1ag0645 | Cone-Chr1:6178565 | Cone10ag0307 | Cone-Chr10:1459597 | 8.00E-272 | wgd | |
Cone1ag0645 | Cone-Chr1:6178565 | Cone3ag0336 | Cone-Chr3:1708645 | 8.00E-272 | wgd | |
Cone1ag0645 | Cone-Chr1:6178565 | Cone5ag1152 | Cone-Chr5:5192143 | 6.86E-174 | wgd | |
Cone1ag0645 | Cone-Chr1:6178565 | Cone5ag0269 | Cone-Chr5:1138546 | 4.43E-269 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag0645 | K10355 | - | mdm:103418811 | 748.814 |