Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0674 ATGAAGACCTCATTTCGTAAATCTTCGCCGCCTCTATCTCCACTCCACCACACCTTTTCCGAATCGTTGATGGAGGAGAATATCGAAATTGCTGAATCTATCATCACTAAGTGGGATTCTAATCCGTCATCTGATATTAAGATAAATTCTCTGTTCGGCGATGATCGATATGAAGCCAAACGGTACCTGAAATCTGTTAAGGATTTGCAGACTGCTATGCATTTCCTTGTTCCCGATATGTCACACTCTGATAAGGTCGTGCATGCTCAGAGATTGATGCAGACTGCCATGCAGAGGCTGCAGAAAGAGTTTTACCTGATTTTATCTTCGAATAGGCACAGTTTAGATCCTGAATCTGTTTCTGGACGCTCATCGAGAGCATCGACGGTGACGAGTATCTCTGATTTAGAGGAGGAAGAGGAAGAACTCTGCTTCGCGAATGAATTGGTTTCTCCAGCTCAGCGAGTTCCTATTGCTGTAATGGCGGATTTGAAGGCGATTGCTGGTTGTATGATCTCATCCGGATATGGAAAAGAGTGCGTGAAGATTTATAACATGATTAGAAAATCGATCATCGATGAAGGACTTTATCATCTAGGAGTGGAGAAATTGAGCACGTCGCAGGTGCAGAAAATGGACTGGGAAGTCTTAGCGGCGAAGATGAAGAGCTGGTTGCGCGCTGTGAAAACCGCAGTGAAGACTCTGTTCGACGGAGAGAGAATTCTCTGCGATCACGTCTTTTCGTCTTCTGCTACAGTAAGAGAATCTTGCTTCGCAGAAATCGCTAAAGATGGAGCGATGACTCTGTTTGGCTTCCCTAAATTAGTAGCGAAATGTAAGAAAACGCCGGAGAAAATTTTCCTCACACTAGATCTCTACCAAGCCATCTCCGATCTCTGGCCGGAAATCGAATTCATCTTCTCCTTCGAATCAACCTCAGCCGTCCGATCGCAAGCCGTCACATCACTCGTCAAGCTCGGCGAGGCCGTTCGTATTATGCTCTCTGATTTCGAATCCGCGATCCAGAAGGACTCGTCCAAAACGCCGGTTCCAAACGGCGGTCTGCATCCACTCACGCGTTACGTGATGAACTACATTTCATTCCTCGCCGAGTATCACGAAATACTCGCCGACATAGTCGCCGACTGGCCTCTACCATTGCAGGCTCCCTTGCCAGAATCCTACTTCTCGTGCGACGAGTCCAACGAAAATCCAATGACCGTACGATTCGCCTGGCTCATCCTCGTCTTACTCTGCAAACTCGACCGCAAAGCGGCGCTTTACAAGGACGTGGCTCTCTCTTACATCTTCTTAGCCAATAATCTCCAGTACGTCGTCGTAAAGGTCCGTAGCTCAAACCTCAAGTTCCTCGTCGGCCAAGAATGGATTTCGACGCATGAATCGAAGGTCAAGCAATACGCGTCGAATTACGAGCGGATGGGATGGAGCAAGGTGATCTCATCGCTGCCGGAAAATCCGAAAGCTGAGATTTCTCAAGAGGTGGCAATGCAGCATTATAAGAGTTTCAACGCCGCCTTCGAAGAAGCACACAGGAAACAATCATCATGGGTCGTACCGGACCCGAGACTGCGAGACGAGATTAAGGTGTCGTTGAGGAGGAGACTAGGGGCTCTGTACGGCGAGTTTTACGAGAAGCATCGTGCCGGGTTTAGACGGGTGGTCGGGTCGGAGTCTGTGGTGAGATTTGAACCGGATGATGTAGAGAACTACTTGTCCGATTTGTTCTTTGGGGCTTCTTCAAGTTCGGGTAGTGTTTCCACGTCGGTTTCCTCGTCGGTGGCGTCATCACCGCCGTCGTCTTATCTGAGAGGTCAGTAA 1839 48.45 MKTSFRKSSPPLSPLHHTFSESLMEENIEIAESIITKWDSNPSSDIKINSLFGDDRYEAKRYLKSVKDLQTAMHFLVPDMSHSDKVVHAQRLMQTAMQRLQKEFYLILSSNRHSLDPESVSGRSSRASTVTSISDLEEEEEELCFANELVSPAQRVPIAVMADLKAIAGCMISSGYGKECVKIYNMIRKSIIDEGLYHLGVEKLSTSQVQKMDWEVLAAKMKSWLRAVKTAVKTLFDGERILCDHVFSSSATVRESCFAEIAKDGAMTLFGFPKLVAKCKKTPEKIFLTLDLYQAISDLWPEIEFIFSFESTSAVRSQAVTSLVKLGEAVRIMLSDFESAIQKDSSKTPVPNGGLHPLTRYVMNYISFLAEYHEILADIVADWPLPLQAPLPESYFSCDESNENPMTVRFAWLILVLLCKLDRKAALYKDVALSYIFLANNLQYVVVKVRSSNLKFLVGQEWISTHESKVKQYASNYERMGWSKVISSLPENPKAEISQEVAMQHYKSFNAAFEEAHRKQSSWVVPDPRLRDEIKVSLRRRLGALYGEFYEKHRAGFRRVVGSESVVRFEPDDVENYLSDLFFGASSSSGSVSTSVSSSVASSPPSSYLRGQ 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6316183 6318308 + Conep01aG0070400.1 Cone1ag0674 431365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0674 612 MobiDBLite consensus disorder prediction 586 612 - -
Cone1ag0674 612 Pfam Exo70 exocyst complex subunit C-terminal 222 580 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cone1ag0674 612 PANTHER EXOCYST COMPLEX PROTEIN EXO70 21 584 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cone1ag0674 612 Pfam Exocyst complex component Exo70 N-terminal 28 109 - -
Cone1ag0674 612 SUPERFAMILY Cullin repeat-like 45 582 IPR016159 -
Cone1ag0674 612 Gene3D Exocyst complex component Exo70 33 590 - -
Cone1ag0674 612 FunFam Exocyst subunit Exo70 family protein 45 590 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0674 Cone-Chr1:6316183 Cone20ag1348 Cone-Chr20:8666061 1.01E-107 dispersed
Cone1ag0674 Cone-Chr1:6316183 Cone10ag0284 Cone-Chr10:1348849 2.02E-209 wgd
Cone1ag0674 Cone-Chr1:6316183 Cone11ag1266 Cone-Chr11:9409923 9.42E-264 wgd
Cone1ag0674 Cone-Chr1:6316183 Cone11ag1101 Cone-Chr11:8582489 2.03E-187 wgd
Cone1ag0674 Cone-Chr1:6316183 Cone13ag1312 Cone-Chr13:9740457 2.40E-185 wgd
Cone1ag0674 Cone-Chr1:6316183 Cone18ag0474 Cone-Chr18:2306911 1.34E-186 wgd
Cone1ag0674 Cone-Chr1:6316183 Cone18ag0321 Cone-Chr18:1595951 7.88E-264 wgd
Cone1ag0674 Cone-Chr1:6316183 Cone19ag1300 Cone-Chr19:8771675 1.16E-191 wgd
Cone1ag0674 Cone-Chr1:6316183 Cone3ag0313 Cone-Chr3:1592344 3.06E-209 wgd
Cone1ag0674 Cone-Chr1:6316183 Cone5ag1180 Cone-Chr5:5298449 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0674 K07195 - mdm:103447762 747.273