Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0678 ATGGGTCATACAAGACTAGAATTCCTCATCTGGGTCCTATCCATTTTCTGTTTTACTTGGATTTCTAGTGGGTTCAATCCAGTAGACAATTACCTTATAGATTGTGGATCATCCACCCCTACTTCGGTTGGTCAGAGAAACTTCTCTTCCGATGATTCCGCCGCGAAATATCTTTCAACCCCTCAAGACATACTTGCGAAGAACGCCACCTCTTTGAGCTCTACTTCCAATTCATCTAATAATCCACAACTCTATCAAACTGCAAGAGTTTTTACCGCAGCTTCAAAGTATACGTTTCCAATCAAGCAGATCGGAAGGCATTGGATCCGCCTTTACTTCTACCCATTTTCTTATACCGGCTACAATTTAACCTCTGCCCATTTTTCCATATCAACCCAAAACCATGTCCTTGTCACCAATTTCGCTCCCCCTAAAACCCCCCTGGTCAAGGAGTTCTCCATCAATCTAACCTCAGACTCCCTCGTAATTACGTTCACACCATCAGAGAATTCCTTTGCATTCTTGAACGGAATCGAAGTAGTTTCCATTCCAGACACGATCATAACAGACGATGCGATTAACGTCAACCCACGCGGTCAATTCCAAGGGTTGTTAACTCAAGCATTAGAAACAGTTGCCCGGGTCAACATGGGCGGGCCCCAGGTGACATCTGACGCCGATATCCTCTGGCGAAACTGGGTCCCGGATCAATCGTTTCTGGTCCAACAAAACTTGGCAAAAAACTTTTCAAACATTCCAGCTGTCCAATACATTCCAGGAGGGGCGACTGAAGATATTGCTCCAAAATCTGTTTATGGGACTGTATCTGAAATGAACTCAGCAGCTGACCCGAACTACAATTTCAATATGACATGGCAGTTTGAGGTGGACCCTGGGTTCCAGTACCTTGTCCGGCTTCACTTTTGCGACATCGTGAGTCAATCTCTTAACCAACTTTACTTCTCTATTTACCTCGACTCATATATTGTCGCCCAGGATTTTGATCTCTCTTCAGAAACTAATGCTCTAGCTGCTGCTTATTATATGGATGCTGTTTCAATGGTAACTAGTAGTAACATGATCCGGGTTAGTATTGGTCCGTCTAGTCTATCCGGTAATAACCCTGATGGCATTCTGAATGGGCTGGAGCTAATGAAGATGAACAATTCGGAAGGTAGTCTTGCCAGAGCGGGCGGGTATATTGGTAATTCTTCGGATTCAAGTTCGAATAACAAGAATATTGGTGTGATAGTTGGAGCAAGTGTTGGAGCAGTTATTGCTGTTATATTATTAGGGATTCTGTTCATATGCTGTAGAAAGAGAAGACGGGAGATGCTCCGTGCCGAGTCTAAGACGTGGATTCCATTATCGATCAATGGTGGAAATTCACATACCATGGCGAGTAAATATTCAAACAGAACGATCACGAGCATTGGTTCAAACTATGGATATAGGATCCCGTTCCTTGCTGTTCAAGAAGCTACAAATAATTTCGACGAAAGTTGGGTTATAGGGATAGGCGGGTTTGGAAAAGTATACAAGGGAGTTCTAAATGAAGGAACAAAAGTAGCTGTTAAGAGGGGAAACCCTAAATCCCAACAGGGATTAGCTGAGTTTCAAACCGAAATCGAAATGCTGTCTCAATTCCGGCATAGACATCTTGTCTCGCTTATTGGGTATTGTGATGAAAAGAATGAAATGATCTTGGTTTATGAGTATATGGAGAATGGGACCTTAAAGGCTCATTTATATGGCTCGAATCTTCCGAGCTTGAGTTGGAAGGATCGGCTCGAAATATGCATAGGATCAGCTAGAGGGCTTCATTATCTTCACACGGGTTATGCAAAACCGGTCATTCATCGGGATGTTAAATCGGCTAATATCCTGCTTGATGAGAAGCTGATGGCTAAGGTAGCCGATTTTGGGCTTTCAAAAACTGGGCCCGAAATCGACCAGACCCATGTTAGTACTGCGGTGAAGGGTAGTTTTGGGTATTTAGATCCAGAGTATTTTAGACGGCAACAGTTGACGGAAAAGTCCGATGTGTATTCTTTTGGGGTTGTTTTGTTCGAGGTGCTTTGTGCTAGGCCTGTTATAGACCCGTCACTTCCTAGAGAAATGGTGAATTTAGCAGAATGGGCCATGAAGTGGCAGAAGAAAGGGCAGTTAAGCCAGATTATTGACCCGACTTTAGCCGGGAAAGTGAAACCGGATTCTTTAAGGAAGTTTGGGGAGACTGCTGAGAAGTGCTTGGCAGATTATGGTGTGGACCGTCCCTCTATGGGAGATGTGTTGTGGAATCTCGAATATGCCCTTCAGTTGCATGAAGCAGTGTTAGAAGCAGAAGGGCAAGAAGAGAATAGTACAAATATGATTGGGGAGCTTTCGCCTCAAGTAAATAATTTCAATCCGGTTGACAATTCGGGTGTTGATTTGGGTACCGATTTTGATCAAGTGCATGGAGTTGATGATCTTTCTGGGGTTTCCATGAGCCGGGTTTTCTCTCAGCTGGTTAAATCCGAGGGAAGGTGA 2532 43.88 MGHTRLEFLIWVLSIFCFTWISSGFNPVDNYLIDCGSSTPTSVGQRNFSSDDSAAKYLSTPQDILAKNATSLSSTSNSSNNPQLYQTARVFTAASKYTFPIKQIGRHWIRLYFYPFSYTGYNLTSAHFSISTQNHVLVTNFAPPKTPLVKEFSINLTSDSLVITFTPSENSFAFLNGIEVVSIPDTIITDDAINVNPRGQFQGLLTQALETVARVNMGGPQVTSDADILWRNWVPDQSFLVQQNLAKNFSNIPAVQYIPGGATEDIAPKSVYGTVSEMNSAADPNYNFNMTWQFEVDPGFQYLVRLHFCDIVSQSLNQLYFSIYLDSYIVAQDFDLSSETNALAAAYYMDAVSMVTSSNMIRVSIGPSSLSGNNPDGILNGLELMKMNNSEGSLARAGGYIGNSSDSSSNNKNIGVIVGASVGAVIAVILLGILFICCRKRRREMLRAESKTWIPLSINGGNSHTMASKYSNRTITSIGSNYGYRIPFLAVQEATNNFDESWVIGIGGFGKVYKGVLNEGTKVAVKRGNPKSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILVYEYMENGTLKAHLYGSNLPSLSWKDRLEICIGSARGLHYLHTGYAKPVIHRDVKSANILLDEKLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWQKKGQLSQIIDPTLAGKVKPDSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLHEAVLEAEGQEENSTNMIGELSPQVNNFNPVDNSGVDLGTDFDQVHGVDDLSGVSMSRVFSQLVKSEGR 843
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 6360381 6363584 + Conep01aG0071000.1 Cone1ag0678 431369
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0678 843 Gene3D Transferase(Phosphotransferase) domain 1 574 793 - -
Cone1ag0678 843 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524(InterPro)
Cone1ag0678 843 FunFam Receptor-like protein kinase FERONIA 574 790 - -
Cone1ag0678 843 CDD STKc_IRAK 504 769 - -
Cone1ag0678 843 ProSiteProfiles Protein kinase domain profile. 498 778 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag0678 843 FunFam Receptor-like protein kinase FERONIA 208 389 - -
Cone1ag0678 843 SUPERFAMILY Protein kinase-like (PK-like) 474 769 IPR011009 -
Cone1ag0678 843 Gene3D - 30 183 - -
Cone1ag0678 843 Gene3D - 207 389 - -
Cone1ag0678 843 SMART serkin_6 498 771 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag0678 843 Pfam Protein tyrosine and serine/threonine kinase 503 695 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag0678 843 Gene3D Phosphorylase Kinase; domain 1 460 573 - -
Cone1ag0678 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag0678 843 PANTHER OS07G0166700 PROTEIN 486 775 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Cone1ag0678 843 FunFam receptor-like protein kinase FERONIA 462 573 - -
Cone1ag0678 843 Pfam Malectin-like domain 33 386 IPR024788 -
Cone1ag0678 843 FunFam Putative receptor-like protein kinase 30 184 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0678 Cone-Chr1:6360381 Cone6ag0119 Cone-Chr6:572346 3.65E-283 dispersed
Cone1ag0305 Cone-Chr1:2291079 Cone1ag0678 Cone-Chr1:6360381 1.29E-215 transposed
Cone1ag0678 Cone-Chr1:6360381 Cone1ag1326 Cone-Chr1:56415284 9.65E-259 wgd
Cone1ag0678 Cone-Chr1:6360381 Cone13ag1294 Cone-Chr13:9676434 1.43E-70 wgd
Cone1ag0678 Cone-Chr1:6360381 Cone5ag1186 Cone-Chr5:5339864 0 wgd
Cone1ag0678 Cone-Chr1:6360381 Cone5ag0310 Cone-Chr5:1304876 1.14E-285 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82473 None None None None Cone PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0678 - - - 0.0