Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag0678 | ATGGGTCATACAAGACTAGAATTCCTCATCTGGGTCCTATCCATTTTCTGTTTTACTTGGATTTCTAGTGGGTTCAATCCAGTAGACAATTACCTTATAGATTGTGGATCATCCACCCCTACTTCGGTTGGTCAGAGAAACTTCTCTTCCGATGATTCCGCCGCGAAATATCTTTCAACCCCTCAAGACATACTTGCGAAGAACGCCACCTCTTTGAGCTCTACTTCCAATTCATCTAATAATCCACAACTCTATCAAACTGCAAGAGTTTTTACCGCAGCTTCAAAGTATACGTTTCCAATCAAGCAGATCGGAAGGCATTGGATCCGCCTTTACTTCTACCCATTTTCTTATACCGGCTACAATTTAACCTCTGCCCATTTTTCCATATCAACCCAAAACCATGTCCTTGTCACCAATTTCGCTCCCCCTAAAACCCCCCTGGTCAAGGAGTTCTCCATCAATCTAACCTCAGACTCCCTCGTAATTACGTTCACACCATCAGAGAATTCCTTTGCATTCTTGAACGGAATCGAAGTAGTTTCCATTCCAGACACGATCATAACAGACGATGCGATTAACGTCAACCCACGCGGTCAATTCCAAGGGTTGTTAACTCAAGCATTAGAAACAGTTGCCCGGGTCAACATGGGCGGGCCCCAGGTGACATCTGACGCCGATATCCTCTGGCGAAACTGGGTCCCGGATCAATCGTTTCTGGTCCAACAAAACTTGGCAAAAAACTTTTCAAACATTCCAGCTGTCCAATACATTCCAGGAGGGGCGACTGAAGATATTGCTCCAAAATCTGTTTATGGGACTGTATCTGAAATGAACTCAGCAGCTGACCCGAACTACAATTTCAATATGACATGGCAGTTTGAGGTGGACCCTGGGTTCCAGTACCTTGTCCGGCTTCACTTTTGCGACATCGTGAGTCAATCTCTTAACCAACTTTACTTCTCTATTTACCTCGACTCATATATTGTCGCCCAGGATTTTGATCTCTCTTCAGAAACTAATGCTCTAGCTGCTGCTTATTATATGGATGCTGTTTCAATGGTAACTAGTAGTAACATGATCCGGGTTAGTATTGGTCCGTCTAGTCTATCCGGTAATAACCCTGATGGCATTCTGAATGGGCTGGAGCTAATGAAGATGAACAATTCGGAAGGTAGTCTTGCCAGAGCGGGCGGGTATATTGGTAATTCTTCGGATTCAAGTTCGAATAACAAGAATATTGGTGTGATAGTTGGAGCAAGTGTTGGAGCAGTTATTGCTGTTATATTATTAGGGATTCTGTTCATATGCTGTAGAAAGAGAAGACGGGAGATGCTCCGTGCCGAGTCTAAGACGTGGATTCCATTATCGATCAATGGTGGAAATTCACATACCATGGCGAGTAAATATTCAAACAGAACGATCACGAGCATTGGTTCAAACTATGGATATAGGATCCCGTTCCTTGCTGTTCAAGAAGCTACAAATAATTTCGACGAAAGTTGGGTTATAGGGATAGGCGGGTTTGGAAAAGTATACAAGGGAGTTCTAAATGAAGGAACAAAAGTAGCTGTTAAGAGGGGAAACCCTAAATCCCAACAGGGATTAGCTGAGTTTCAAACCGAAATCGAAATGCTGTCTCAATTCCGGCATAGACATCTTGTCTCGCTTATTGGGTATTGTGATGAAAAGAATGAAATGATCTTGGTTTATGAGTATATGGAGAATGGGACCTTAAAGGCTCATTTATATGGCTCGAATCTTCCGAGCTTGAGTTGGAAGGATCGGCTCGAAATATGCATAGGATCAGCTAGAGGGCTTCATTATCTTCACACGGGTTATGCAAAACCGGTCATTCATCGGGATGTTAAATCGGCTAATATCCTGCTTGATGAGAAGCTGATGGCTAAGGTAGCCGATTTTGGGCTTTCAAAAACTGGGCCCGAAATCGACCAGACCCATGTTAGTACTGCGGTGAAGGGTAGTTTTGGGTATTTAGATCCAGAGTATTTTAGACGGCAACAGTTGACGGAAAAGTCCGATGTGTATTCTTTTGGGGTTGTTTTGTTCGAGGTGCTTTGTGCTAGGCCTGTTATAGACCCGTCACTTCCTAGAGAAATGGTGAATTTAGCAGAATGGGCCATGAAGTGGCAGAAGAAAGGGCAGTTAAGCCAGATTATTGACCCGACTTTAGCCGGGAAAGTGAAACCGGATTCTTTAAGGAAGTTTGGGGAGACTGCTGAGAAGTGCTTGGCAGATTATGGTGTGGACCGTCCCTCTATGGGAGATGTGTTGTGGAATCTCGAATATGCCCTTCAGTTGCATGAAGCAGTGTTAGAAGCAGAAGGGCAAGAAGAGAATAGTACAAATATGATTGGGGAGCTTTCGCCTCAAGTAAATAATTTCAATCCGGTTGACAATTCGGGTGTTGATTTGGGTACCGATTTTGATCAAGTGCATGGAGTTGATGATCTTTCTGGGGTTTCCATGAGCCGGGTTTTCTCTCAGCTGGTTAAATCCGAGGGAAGGTGA | 2532 | 43.88 | MGHTRLEFLIWVLSIFCFTWISSGFNPVDNYLIDCGSSTPTSVGQRNFSSDDSAAKYLSTPQDILAKNATSLSSTSNSSNNPQLYQTARVFTAASKYTFPIKQIGRHWIRLYFYPFSYTGYNLTSAHFSISTQNHVLVTNFAPPKTPLVKEFSINLTSDSLVITFTPSENSFAFLNGIEVVSIPDTIITDDAINVNPRGQFQGLLTQALETVARVNMGGPQVTSDADILWRNWVPDQSFLVQQNLAKNFSNIPAVQYIPGGATEDIAPKSVYGTVSEMNSAADPNYNFNMTWQFEVDPGFQYLVRLHFCDIVSQSLNQLYFSIYLDSYIVAQDFDLSSETNALAAAYYMDAVSMVTSSNMIRVSIGPSSLSGNNPDGILNGLELMKMNNSEGSLARAGGYIGNSSDSSSNNKNIGVIVGASVGAVIAVILLGILFICCRKRRREMLRAESKTWIPLSINGGNSHTMASKYSNRTITSIGSNYGYRIPFLAVQEATNNFDESWVIGIGGFGKVYKGVLNEGTKVAVKRGNPKSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILVYEYMENGTLKAHLYGSNLPSLSWKDRLEICIGSARGLHYLHTGYAKPVIHRDVKSANILLDEKLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWQKKGQLSQIIDPTLAGKVKPDSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLHEAVLEAEGQEENSTNMIGELSPQVNNFNPVDNSGVDLGTDFDQVHGVDDLSGVSMSRVFSQLVKSEGR | 843 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 6360381 | 6363584 | + | Conep01aG0071000.1 | Cone1ag0678 | 431369 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag0678 | 843 | Gene3D | Transferase(Phosphotransferase) domain 1 | 574 | 793 | - | - | |
Cone1ag0678 | 843 | ProSitePatterns | Protein kinases ATP-binding region signature. | 504 | 526 | IPR017441 | GO:0005524(InterPro) | |
Cone1ag0678 | 843 | FunFam | Receptor-like protein kinase FERONIA | 574 | 790 | - | - | |
Cone1ag0678 | 843 | CDD | STKc_IRAK | 504 | 769 | - | - | |
Cone1ag0678 | 843 | ProSiteProfiles | Protein kinase domain profile. | 498 | 778 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag0678 | 843 | FunFam | Receptor-like protein kinase FERONIA | 208 | 389 | - | - | |
Cone1ag0678 | 843 | SUPERFAMILY | Protein kinase-like (PK-like) | 474 | 769 | IPR011009 | - | |
Cone1ag0678 | 843 | Gene3D | - | 30 | 183 | - | - | |
Cone1ag0678 | 843 | Gene3D | - | 207 | 389 | - | - | |
Cone1ag0678 | 843 | SMART | serkin_6 | 498 | 771 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag0678 | 843 | Pfam | Protein tyrosine and serine/threonine kinase | 503 | 695 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag0678 | 843 | Gene3D | Phosphorylase Kinase; domain 1 | 460 | 573 | - | - | |
Cone1ag0678 | 843 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 618 | 630 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag0678 | 843 | PANTHER | OS07G0166700 PROTEIN | 486 | 775 | IPR045272 | GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER) | |
Cone1ag0678 | 843 | FunFam | receptor-like protein kinase FERONIA | 462 | 573 | - | - | |
Cone1ag0678 | 843 | Pfam | Malectin-like domain | 33 | 386 | IPR024788 | - | |
Cone1ag0678 | 843 | FunFam | Putative receptor-like protein kinase | 30 | 184 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag0678 | Cone-Chr1:6360381 | Cone6ag0119 | Cone-Chr6:572346 | 3.65E-283 | dispersed | |
Cone1ag0305 | Cone-Chr1:2291079 | Cone1ag0678 | Cone-Chr1:6360381 | 1.29E-215 | transposed | |
Cone1ag0678 | Cone-Chr1:6360381 | Cone1ag1326 | Cone-Chr1:56415284 | 9.65E-259 | wgd | |
Cone1ag0678 | Cone-Chr1:6360381 | Cone13ag1294 | Cone-Chr13:9676434 | 1.43E-70 | wgd | |
Cone1ag0678 | Cone-Chr1:6360381 | Cone5ag1186 | Cone-Chr5:5339864 | 0 | wgd | |
Cone1ag0678 | Cone-Chr1:6360381 | Cone5ag0310 | Cone-Chr5:1304876 | 1.14E-285 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82473 | None | None | None | None | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag0678 | - | - | - | 0.0 |