Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0679 ATGGCTCAGAAGAATGCACTTGTCCGGAAGCTTCCCAGTGTTGAGACTCTCGGTTGCACGAATGTAATTTGTTCTGATAAAACGGGTACTTTGACAACTAACCAGATGGCCGTGGCAAAACTAATGGCTATTGGATCTAGGGCTGGAACTCTCCGGGCATTTGAGGTGGAAGGGACCACATTCAATCCTTTTGATGGAAAGATACATGGCTGGCCTGAGGGGGAAATGGATGCTAATCTTCAAATGATAGCAAAGATTGCTAGTGTTTGTAACGATGCAAGTATAGAACAATCTGGGCAACAATTTGTTTCAACTGGAATGGCCACTGAGGCAGCATTGAAAGTTCTAGTGGAGAAAATGGGTCTGCCTGAAGGAGTTGGTTCTGGTTTGCCTTCTATCAGGGGGGATGTACTTCGATGCTGTAAACGATGGAACAAAATAGAATGTAGGATCGCTACTCTTGAGTTTGATCGAGATCGTAAATCCATGGGAGTTATAGTTAATTCCAGCTCAGGGAAGAAGACATTGCTAATCAATGGTGCAGTTGAAAATCTATTGGAACGAAGTACATTCATTCAGTTGCGAGATGGATCTGTAATAAACTTAGATGATAATTCAAGGAAGCTCATTTTAGAAAGCCTTCATGAAATGTCAACAAGTGTACTACGATGTTTGGGCTTTGCATACAAGGAGGACCTTTCCGAGTTTGCTACATATAACGGCGATGAAGATCATCCTGCTCATCAGCTTTTGCTTAACCCATCCAATTACTCCTCAATTGAGAGTAATCTCATTTTTGTCGGCTTAGTGGGACTGAGGGATCCTCCGAGGAAAGAAGTCCCTCAAGCAATTGAGGACTGCAAAACTGCTGGAATTCGAGTCATGGTTATCACAGGGGACAACAGGAATACAGCTGAGGCTATTTGTCGAGAAATAGGTGTATTTGGATCTCATGAAAATATCAAAACGAAAAGCTTAACAGGAAGAGAATTCATGGATATGGATCGTAACAAACGGAAAGTTTATATAAGGCAAAGTGGAGGACTCCTTTTCTCTAGAGCTGAACCAAGGCACAAACAAGAGATTGTTAGGTTGCTTGAAGAAGAAGGTGAAGTTGTTTCAATGACTGGAGATGGAGTCAATGATGCTCCCGCTTTGAAATTGGCCAATATAGGAATCGCAATGGGCATTGATGGGATTCAGGTTGCAAAGGAAGCTTCAGACATGGTCCCAGCGGATGATAATTTTAGCACAATAGTTGCAGCTGTTGGGGAAGGCAGATCTATTTACAACAACATGAAGGCTTTTATTAGATACATGATTTTATCAAATGTTGGTGAGGTTGCCTCTATATTTCTGACGGCAGCACTTGGTATTCCCGAAGGCATGATTCCGGTCCAGCTTCTCTGGGTCAATCTTGTTACAGATGGGCCCCCAACAACAGCTCTGGGCTTCAATCCACCAGACAATGATATTATGAAGAAACCTCCAAGAAAAAGTGATGATTCCTTGATCAGTCCTTGGATTCTTTTCCGCTATCTGAGATGGCCATACCCTCGTTACATTCTCTCAACTTGCAAACTGGAGCCAATGCTCCTCTTGGGACGGGTTTCAGTCTCCCCATTTTCAGCTGGATCTCAAGTGTTCAATTTTGATACAAATCCTTGTGAGTACTTCCATTATGGAAAAATCAAGGCCTCAACTCTCTCCCTTTCAGTCTTGGTTGCAATCGAGATGTTCAACTCCCTTAATGCCCTTTCTGAGGATGGGAGCTTGTTAACCATGCCTCCGTGGGTTAACCCATGGCTCCTTCTCGCCATGTCAGTTTCATTCGGGTTACACTTCTTGATCCTCTACGCGCCATTCCTTGCTCAAGTGTTTTGGATCGTTCCCCTCAGTTTGAAAGAATGGCTTTTGTTACTTGCTGTTTCTTTTCCAGTGATTATTATCGATGAGATTCTCAAATTTGTGGGTAGGTGTACAAGTGGATCGCAAAGGTCAAGTGCTCGTAAATCGACAAAGCACAAAGAAGATTGA 2037 43.05 MAQKNALVRKLPSVETLGCTNVICSDKTGTLTTNQMAVAKLMAIGSRAGTLRAFEVEGTTFNPFDGKIHGWPEGEMDANLQMIAKIASVCNDASIEQSGQQFVSTGMATEAALKVLVEKMGLPEGVGSGLPSIRGDVLRCCKRWNKIECRIATLEFDRDRKSMGVIVNSSSGKKTLLINGAVENLLERSTFIQLRDGSVINLDDNSRKLILESLHEMSTSVLRCLGFAYKEDLSEFATYNGDEDHPAHQLLLNPSNYSSIESNLIFVGLVGLRDPPRKEVPQAIEDCKTAGIRVMVITGDNRNTAEAICREIGVFGSHENIKTKSLTGREFMDMDRNKRKVYIRQSGGLLFSRAEPRHKQEIVRLLEEEGEVVSMTGDGVNDAPALKLANIGIAMGIDGIQVAKEASDMVPADDNFSTIVAAVGEGRSIYNNMKAFIRYMILSNVGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPTTALGFNPPDNDIMKKPPRKSDDSLISPWILFRYLRWPYPRYILSTCKLEPMLLLGRVSVSPFSAGSQVFNFDTNPCEYFHYGKIKASTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYAPFLAQVFWIVPLSLKEWLLLLAVSFPVIIIDEILKFVGRCTSGSQRSSARKSTKHKED 678
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6365823 6368921 + Conep01aG0071100.1 Cone1ag0679 431370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0679 678 ProSitePatterns E1-E2 ATPases phosphorylation site. 26 32 IPR018303 -
Cone1ag0679 678 PRINTS P-type cation-transporting ATPase superfamily signature 376 395 - -
Cone1ag0679 678 PRINTS P-type cation-transporting ATPase superfamily signature 400 412 - -
Cone1ag0679 678 PRINTS P-type cation-transporting ATPase superfamily signature 268 279 - -
Cone1ag0679 678 PRINTS P-type cation-transporting ATPase superfamily signature 24 38 - -
Cone1ag0679 678 PRINTS P-type cation-transporting ATPase superfamily signature 290 300 - -
Cone1ag0679 678 Pfam Cation transport ATPase (P-type) 89 192 - -
Cone1ag0679 678 FunFam Sodium/potassium-transporting ATPase subunit alpha 265 416 - -
Cone1ag0679 678 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 31 272 IPR023299 GO:0000166(InterPro)
Cone1ag0679 678 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 660 IPR023298 -
Cone1ag0679 678 SUPERFAMILY HAD-like 22 479 IPR036412 -
Cone1ag0679 678 Pfam Cation transporting ATPase, C-terminus 462 657 IPR006068 -
Cone1ag0679 678 SFLD C1.7: P-type atpase like 5 428 - -
Cone1ag0679 678 Gene3D - 1 659 - -
Cone1ag0679 678 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 541 662 - -
Cone1ag0679 678 NCBIfam HAD-IC family P-type ATPase 350 460 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone1ag0679 678 Gene3D - 21 421 IPR023214 -
Cone1ag0679 678 FunFam Phospholipid-transporting ATPase IC 21 33 - -
Cone1ag0679 678 PANTHER CALCIUM-TRANSPORTING ATPASE 1 667 - GO:0005388(PANTHER)|GO:0006874(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0070588(PANTHER)
Cone1ag0679 678 Pfam haloacid dehalogenase-like hydrolase 267 389 - -
Cone1ag0679 678 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 34 275 - -
Cone1ag0679 678 Gene3D - 34 275 IPR023299 GO:0000166(InterPro)
Cone1ag0679 678 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 381 522 - -
Cone1ag0679 678 SFLD p-type atpase 5 428 IPR044492 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0679 Cone-Chr1:6365823 Cone7ag1325 Cone-Chr7:9695965 7.20E-155 dispersed
Cone1ag0679 Cone-Chr1:6365823 Cone11ag1268 Cone-Chr11:9421252 0 wgd
Cone1ag0679 Cone-Chr1:6365823 Cone18ag0318 Cone-Chr18:1574066 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0679 K01537 - cit:102614973 1033.09