Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0698 ATGGCGTTCATAGACAACTTACCGCCTATTGATCTGATGCGTTCCGAGAAGATGACTATGGTTCAGCTTATCATCCCTTTCGAATCTGCTCATCGAGCCGTATCGTATCTCGGCGAACTAGGCCTCATTCAATTTAAAGACTTAAATGCTGATAAAAGCCCTTTCCAGCGGACATTTGTTAACCAGGTAAAACGGTGTGCAGAGATGTCCAGAAAGCTTCGACTTTTCAAAGATCAAATCAGTAAAGCTGGGATAGTTTCTCCTTTACTTCCAGCTCCACAACAAGATATCGAGTTAGAAGATTTAGAGTTACAACTAGCTGAGCATGAGCATGAGCTGATTGAGACGAATTCTAACGGTGAGAAACTTCGACAATCATATAACGAGCTCCTCGAATTTAAGATTGTATTACAAAAGGCAAGTGGATTTCTTGTATCAAGTAATAGTCATGCAGTTTCAGCAGAGAGAGAATTAAGTGAGGATGTCTACTTTAATGATAACCATGCTGAGACTGCATCATTACTTGAGCAGGAGTTGGGACCAAGACCAGCAAACCAATCTGGTTTGAGATTTGTCAGTGGGATCATTTGCAAATCCAAAGCTCTTAGATTTGAGAGGATGTTGTTTCGTACTACAAGGGGAAATATGCTTTTTAATCAAGCATCCACCGATGTACAGATCATGGATCCTGTTTCTGCAGAAATGGTGGAGAAAGCAGTATTTGTAGTGTTTTTCTCAGGACAACAGGCCAGAACAAAGATCCTGAAAATTTGTGAGGCTTTTAGAGCAAATTGTTATCCTGTTCCTGAAGATATAACCAAGCAGACGCAATTAACTAGAGAAGTCTCATCACGACTCTCTGAACTGGAAGTTACTTTGGATGCTGGGGTCCTTCACCGAAATAAGGCCCTTTCATCTATAGGTTATCACCTCATGAAGTGGATGAATATGGTTAAAAGGGAGAAAGCTGTGTTTGATACATTGAATATGTTAAACTTTGACGTTATGAAAAAGTGCCTTGTGGCGGAGGGTTGGTGCCCAATTTTTGCAACAAATCAGATTCGAGAGGCTTTGCAGCGGGCAACATTTGATAGTAGTTCACAAGTGGGCATTATATTTCATGGGGTGGACACTATAGAATCACCGCCTACATATATCAGAACAAATTGTTTCACTAATGCATTTCAAGAAATTGTTGATGCATATGGTGTTGCGAGATATCGAGAAGCAAATCCAGCAGTTTACACTGTTATTACATTTCCATTTCTCTTTGCGGTGATGTTTGGGGACTGGGGTCATGGAATATGCCTGTTAGTGGGAGCTTTAATTCTTATTGCTCGAGAAAGTAAACTTAGTAATCGGAAATTGGGAAGCTTTATGGAGATGCTATTTGGTGGACGCTATGTGCTTCTTTTGATGTCGCTTTTTTCAATATACTGTGGGTTGATTTACAATGAATTCTTCTCTGTTCCATTTCAAATATTTGGTGGGTCTGCTTACAAATGCCGAGATGATACTTGCAGTGATTCAAATACAGTGGGCTTAATCAAATACCGAGATCCATATCCATTTGGTGTAGACCCAAGTTGGCGTGGAAGTCGTTCGGAACTTCCTTTTCTGAACTCCCTTAAAATGAAGATGTCTATCTTGATGGGGGTGGCTCAGATGAACGTGGGGATCATTTTAAGTTATTTCAATGCACGTTTTTTTGGCAGCTCCATTGACATAAGGTATCAGTGTGTGCCACAAATGATCTTTTTGAACTGCCTTTTTGGGTATCTTTCCCTTCTCATTATCATCAAGTGGTGCACTGGCTCACAGGCAGATCTCTATCATGTAATGATTTACATGTTTTTGAGTCCCACTGATGCTCTTGGCGAGAATGAATTATTTTGGGGCCAAAGAGGACTTCAGATTATATTATTGATTCTGGCTGTAATTGCAGTGCCATGGATGCTCTTTCCGAAACCTTTTATACTTAAGAAGCTTCATACAGAGAGATTTCAAGGCCGTGCTTATGGGATGCTAGGTACCTCTGAGATGGACCTTGACATGGAACCCGATTCTGCAAGACAAGATATAGAGGATTTTAACTTCAGCGAGGTCTTTGTTCACCAAATGATACATTCTATAGAGTTTGTTTTGGGTGCAGTTTCAAACACAGCATCATATCTACGACTTTGGGCTTTAAGCTTGGCCCACTCAGAATTATCAACTGTTTTCTATGAGAAAGTTCTCCTTCTTGCCTGGGGGTACAATAACATTATCATTCGACTGGTTGGGTTAGCTGTGTTTACATTTGCAACTGCTTTTATTCTGCTCATGATGGAGACACTCAGTGCCTTTCTTCATGCCTTGCGTCTTCATTGGGTCGAATTTCAAACCAAGTTCTACCATGGTGATGGTTTCAAGTTCCGGCCCTTCTCTTTCTCCTCCATCGTGGACCATGAAGACGATTAG 2460 40.85 MAFIDNLPPIDLMRSEKMTMVQLIIPFESAHRAVSYLGELGLIQFKDLNADKSPFQRTFVNQVKRCAEMSRKLRLFKDQISKAGIVSPLLPAPQQDIELEDLELQLAEHEHELIETNSNGEKLRQSYNELLEFKIVLQKASGFLVSSNSHAVSAERELSEDVYFNDNHAETASLLEQELGPRPANQSGLRFVSGIICKSKALRFERMLFRTTRGNMLFNQASTDVQIMDPVSAEMVEKAVFVVFFSGQQARTKILKICEAFRANCYPVPEDITKQTQLTREVSSRLSELEVTLDAGVLHRNKALSSIGYHLMKWMNMVKREKAVFDTLNMLNFDVMKKCLVAEGWCPIFATNQIREALQRATFDSSSQVGIIFHGVDTIESPPTYIRTNCFTNAFQEIVDAYGVARYREANPAVYTVITFPFLFAVMFGDWGHGICLLVGALILIARESKLSNRKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFQIFGGSAYKCRDDTCSDSNTVGLIKYRDPYPFGVDPSWRGSRSELPFLNSLKMKMSILMGVAQMNVGIILSYFNARFFGSSIDIRYQCVPQMIFLNCLFGYLSLLIIIKWCTGSQADLYHVMIYMFLSPTDALGENELFWGQRGLQIILLILAVIAVPWMLFPKPFILKKLHTERFQGRAYGMLGTSEMDLDMEPDSARQDIEDFNFSEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYNNIIIRLVGLAVFTFATAFILLMMETLSAFLHALRLHWVEFQTKFYHGDGFKFRPFSFSSIVDHEDD 819
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6499372 6507099 - Conep01aG0073000.1 Cone1ag0698 431389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0698 819 Pfam V-type ATPase 116kDa subunit family 36 810 IPR002490 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cone1ag0698 819 Coils Coil 92 119 - -
Cone1ag0698 819 PIRSF ATP6V0A1 9 819 IPR026028 GO:0000220(InterPro)|GO:0046961(InterPro)
Cone1ag0698 819 PANTHER VACUOLAR PROTON ATPASES 11 818 IPR002490 GO:0007035(PANTHER)|GO:0016471(PANTHER)|GO:0033179(InterPro)|GO:0046961(InterPro)|GO:0051117(PANTHER)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0698 Cone-Chr1:6499372 Cone3ag1221 Cone-Chr3:30955706 0 dispersed
Cone1ag0698 Cone-Chr1:6499372 Cone5ag1206 Cone-Chr5:5498320 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0698 K02154 - vvi:100250193 1402.5