Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0741 ATGGAGCTTCTCCAACTATCTAATGGGATCTTCATATCTCAAGCTAAGTATGCTAATGACCTTTTAAAAAGGTTCAAGATGGAATGCTTTAAACTTGTTTCCACTCCCCTAGTTGCTGGTGAAAAGTTATCCAAATCTGATGGTTCAGAAATGGTGGATTCAACAAGCTTTAGGAGTCTCATAGAAGGTCTTATGTACCTAACAGCAACAAGGCCTGATCTTATACAAGCTACCTGCTTACTCTCTAGATTCATGCATGAGCCAACTCAAATGCATAATGGGGCTGCTAAGAGGATGTTGAGATATCTAAGTGGCACCTCATCTAATGGAATCTGGTATGAGAAGGGAGAATTGAATTTACATGGCTATGTAGACAGTGATTGGGTCGAATCAATTGATGACATGAAAAGCACAAGTGGCTTCTACTTCTCACTTGACTCAGGAGTCTTCTGCTGGAGCTCTAAGAAACAGCAAGTAGTTGCTCAATCAACGACTGAAGCTGAGTACATTGCAGCAGCCTCAACAGCCAATCAAGCAACTTGGATAAGGAAAATGATGAAAGATCTTGGTTTCATTCAATTGAATCCTACAACTATCTACTGTGATAGTCAATCTGCTATTGTCATATCTGAGAATCCAATTCAGTTTGAAAAGACAAAGCATATTTTGATCAAGTTTCATGTGATTAGGGAGCTTATCAAAAATGGAGAAATAAGGTTTGAATATTGCAATTCTGAAAATCAAAATGCTGACATCTTTACCAAGCCAATCTCTGAGTTCAAGTTTGATTACTTCAAATGTAAATTGGGAGTCACTCACAAAACATTCAAGGAGGAGTGTTTGAAGATTGCTTGTTTGATAAGTGGACATGCAAATGTTCATACCAAGGAAGCCAAAGCTTCGCCCTTGGAACTAACTGTTCTACTTCCTGCGATTGCGGCCAAGATGCTGGAGGAAGCAACAGGATCTGGACATTTACTACATGAATTGCCAATTGCACCTGCAGCCTCAAAGAGTCAACTTTCAAACAGAGTGGTGGTGATCATTGTATTGTTATGCATCTCACTTACAACCTTTGCATTTATAGCCTCAGTTGGATGCTTTCTGTTTAGAAGGAAGCTCCCTATTCAATCCTCAGCATTCTCGACAGACAGAAAAACAAGTTTCAACAGCTTAACCAACTTAATCAGCCGCAAGAGTTTCTCAATTCAAGAAACCAGGGTTAATGTAGGATGCTTTCACATGTCCTCGTGCTTCTTTAGGAGCAAATCAGAGATGATAATTGGAACCATCATCTCATTCTCCTACACCGAATTGGAAAATGCAACTGACAAATTTTCAGAGGCCAACCTTGTTGGACTTGGAGGCAGTAGTTTTGTTTATCGTGGTCAGCTTAACAATGGCCAAATTGTGGCAGTTAAGAGACTACAATTTCAAGGAGCGCCCGATTCAGACTCTTTATTTTTAACAGAGATAGAATTGTTATCGAGACTCCATCACTGCCATGTGGTACCTCTACTAGGCTACTGTTCAGAATTCAGGGGGAAACATACCGAAAGGCTATTGGAGCTGCTCGAGACCTCGAATATCTCCATGAAGCAGCTGCTCCATAAAATTCTTCATAGAGATGTCAAGTCAACAAACATTCTTCTAGATGAAGATTTTAAAGCAAAAATAACAGATCTTGGCATGGCTAGAAGATTAAAAGCTGATGGTGTCCCAAGCTGTTCTAGTTCCCCTGCGAGAATGCAGGGGACTTTTGGGTATTTTGCACCAGAATATGCAATCTTTGGAAGATCATCTCTTAAATCTGATGTATTTAGTTTCGGTGTAGTACTTCTTGAGCTTATCACTGGCCAGCTTCCCATTCAAAAATCAGCCAGCAAAGGAGAAGAAAGCCTTGTTATCTGGGCTACCCCTCGCTTACAGGATAGCAGACGAGTAATAAAAGAGTTTCCAGACCCACATTTAAAGGGACAATTCCCAGAAGAAGAGATGCAAATAATGGCTTATTTAGCAAAGGAGTGTCTTCTGTTGGATCCGGATTCTAGACCAACCATGAGAGAAGTTGTTCAAATCCTTTCAACTATTGCTCCGGATAGTTCCAGAAGGAGAAGCATCCCCTCAAATCTTTTCCAGTCAAGTGAACCATACATGGAAAGAACCCACTTAACTCCTATTTCTGGACAACAATATTACCATGTGGAGGTTGACTAA 2217 40.41 MELLQLSNGIFISQAKYANDLLKRFKMECFKLVSTPLVAGEKLSKSDGSEMVDSTSFRSLIEGLMYLTATRPDLIQATCLLSRFMHEPTQMHNGAAKRMLRYLSGTSSNGIWYEKGELNLHGYVDSDWVESIDDMKSTSGFYFSLDSGVFCWSSKKQQVVAQSTTEAEYIAAASTANQATWIRKMMKDLGFIQLNPTTIYCDSQSAIVISENPIQFEKTKHILIKFHVIRELIKNGEIRFEYCNSENQNADIFTKPISEFKFDYFKCKLGVTHKTFKEECLKIACLISGHANVHTKEAKASPLELTVLLPAIAAKMLEEATGSGHLLHELPIAPAASKSQLSNRVVVIIVLLCISLTTFAFIASVGCFLFRRKLPIQSSAFSTDRKTSFNSLTNLISRKSFSIQETRVNVGCFHMSSCFFRSKSEMIIGTIISFSYTELENATDKFSEANLVGLGGSSFVYRGQLNNGQIVAVKRLQFQGAPDSDSLFLTEIELLSRLHHCHVVPLLGYCSEFRGKHTERLLELLETSNISMKQLLHKILHRDVKSTNILLDEDFKAKITDLGMARRLKADGVPSCSSSPARMQGTFGYFAPEYAIFGRSSLKSDVFSFGVVLLELITGQLPIQKSASKGEESLVIWATPRLQDSRRVIKEFPDPHLKGQFPEEEMQIMAYLAKECLLLDPDSRPTMREVVQILSTIAPDSSRRRSIPSNLFQSSEPYMERTHLTPISGQQYYHVEVD 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6861061 6865465 - Conep01aG0077400.1 Cone1ag0741 431432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0741 738 CDD RNase_HI_RT_Ty1 121 258 - -
Cone1ag0741 738 Gene3D Phosphorylase Kinase; domain 1 418 521 - -
Cone1ag0741 738 SMART serkin_6 446 697 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag0741 738 PANTHER OS01G0750732 PROTEIN 538 706 IPR050885 -
Cone1ag0741 738 ProSiteProfiles Protein kinase domain profile. 446 697 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag0741 738 ProSitePatterns Protein kinases ATP-binding region signature. 452 474 IPR017441 GO:0005524(InterPro)
Cone1ag0741 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag0741 738 Pfam Protein kinase domain 448 692 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag0741 738 SUPERFAMILY Protein kinase-like (PK-like) 431 719 IPR011009 -
Cone1ag0741 738 Gene3D Transferase(Phosphotransferase) domain 1 522 707 - -
Cone1ag0741 738 FunFam receptor-like serine/threonine-protein kinase NCRK 420 524 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0007 Cone-Chr10:69707 Cone1ag0741 Cone-Chr1:6861061 5.07E-38 dispersed
Cone1ag0741 Cone-Chr1:6861061 Cone15ag0598 Cone-Chr15:3064756 2.04E-52 dispersed
Cone3ag0965 Cone-Chr3:5804748 Cone1ag0741 Cone-Chr1:6861061 2.43E-09 dispersed
Cone19ag0381 Cone-Chr19:3257259 Cone1ag0741 Cone-Chr1:6861061 1.02E-177 transposed
Cone1ag0741 Cone-Chr1:6861061 Cone5ag1242 Cone-Chr5:5799358 2.29E-233 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82476 PF00777 Glyco_transf_29 2.60E-34 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0741 - - - 0.0