Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0768 ATGACGGAAAACGGGGAGGATAAATTGCTGGCGGTTGCTCGCCACATCGCTAAAACCCTCGGCCACAATGAATCCATGGCTGATGATATCTTACAGATCTTCTCCACCTTCGACGGCAGGTTTTCACGCGAGAAGATGCTCGACGACGATCCTAGAGCCTTTATTGTACTCGAACGGAACCTGGACTCCCTTGACCGTCAGATTTCTCAGTACGTGTCCAACGAACGCCCGATTTGGGCTGACGCTGCTGATTCCTCGGCCTTCCTCGACGCTATCGACGAGTTGATCGCGATCATCAGGGAATGGACTCCTGTGGCTGGAGACAAGTCTGTCGGCGTGTGCCTAGCTCGTGCTGATGATCTGATGCAGCATACTATGTTCCGAGTGGAGGATGAGTTTAGGTCGTTGATCGAACGCGGTGGCGAGTCGTACGAGTTGACTCGCTCCTCTTACAGGAACGCCGAGTCAACTGGTGATTTGTCCTTTGACTCGGAGGATGAAGAAGTAGGCGGAGGAATTATCAGCGACGGTGAGGATCATGAGATCCCGATAGCCCAACCTATCACTGACTATGACATCGTGATCGACGCGCTTCCTTCAGGTACGATCAGCGATCTCCATGAGATAGCGAAACGCATGGTGGCTGCCGGATTTGCAAAGGAGTGCTCACACGTGTACAGTAGCTCGAGAAGAGACTTCTTGGAAGAGAGCCTCTCGAGATTAGGGCTACAGAAGCTGAGCATAAAAGAAGTTCAGAAGTTGCCGTGGCAAGATCTAGGAGACGAGATTGAGCGATGGATCAAAGCCATGAACGTCGCTCTTAGGATTCTCTTCCCGAGCGAGCGTAGACTATGCGACCGCCTCTTCTCGGGCTTATCTTCTGCCTCCGATCTCTCATTCATGGAGGTATGCAGGGGATCCATGATTCAGCTCTTGAATTTTGCAGATGCAATAGCAATCAGCTCCAGATCTCCTGAGAGGTTGTTCAAAATCCTTGACTTGTACGAGACGTTGAGGGATTTGATGCCAGAGTTCGAGTCAGTATTCTCTGATAAGTACTGTTCGTTTCTTAGAAATGATGTGATTACGATTTGGAAAAGGTTAGGGGAAGCAATCAAAGGGATATTCATGGAACTGGAGAATTCAATCCGTCGAGATCCAGCCAAAGCTGCAGTTCCTGACGGTGGGCTCCACCCGATCACTCGATACGTGATGAACTATCTATTGGCAGCTTGTCGATCTAGGCAGACTCTTGAACAGGTCTTTGACGAAAATACCTTTTCATCAAGAGAGTCGACTTCTCTATCAGTGGAAATTGCCTGGATTATGGAGCGGTTAGAGAGCAATTTAGAGATGAAGTCGAAACTATACAAAGACCCCGCGTTGTGCAATGTTTTCATGATGAATAACGGAAGGTATATCGTGCTGAAGGTAAAAGATAACGATCTCGGTTCGTTCTTAGGAGATGATTGGATTAGGAAACACACCGCTAAAGTCTGGCAGTATTTTGTCAATTACCAGAGGAGCTCGTGGAATAAAGTTCTAGCTGTTTTGAAGATAGAAAATGGCTCATTAGCTCCTAATTTGTCTTCTGCAAATTCCATGAAAGAAAAGCTCAAATCTTTCAACATGTACTTTGATGAAATTTGCAAAATTCAATCTACTTGGATAATTTTCAACGACCAGTTAAGGGACGAAGCAAGGATTTCAGTTGCAAAAACTGTTTTGCCAGCATACCAGAATTTTATTGCCAGGTACCAGGATGTTGTGGAAAATGGGAAGAGGACCGAACGGTATGTTAAGTACACTGCTGAGGATGTGGAAGCTCGGATCAACGATCTGTTTCAGGGGAAGGGTGGATCGGGTAGTGGGCGGGGGAGGTCAAGGTAA 1890 47.3 MTENGEDKLLAVARHIAKTLGHNESMADDILQIFSTFDGRFSREKMLDDDPRAFIVLERNLDSLDRQISQYVSNERPIWADAADSSAFLDAIDELIAIIREWTPVAGDKSVGVCLARADDLMQHTMFRVEDEFRSLIERGGESYELTRSSYRNAESTGDLSFDSEDEEVGGGIISDGEDHEIPIAQPITDYDIVIDALPSGTISDLHEIAKRMVAAGFAKECSHVYSSSRRDFLEESLSRLGLQKLSIKEVQKLPWQDLGDEIERWIKAMNVALRILFPSERRLCDRLFSGLSSASDLSFMEVCRGSMIQLLNFADAIAISSRSPERLFKILDLYETLRDLMPEFESVFSDKYCSFLRNDVITIWKRLGEAIKGIFMELENSIRRDPAKAAVPDGGLHPITRYVMNYLLAACRSRQTLEQVFDENTFSSRESTSLSVEIAWIMERLESNLEMKSKLYKDPALCNVFMMNNGRYIVLKVKDNDLGSFLGDDWIRKHTAKVWQYFVNYQRSSWNKVLAVLKIENGSLAPNLSSANSMKEKLKSFNMYFDEICKIQSTWIIFNDQLRDEARISVAKTVLPAYQNFIARYQDVVENGKRTERYVKYTAEDVEARINDLFQGKGGSGSGRGRSR 629
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53788018 53790256 + Conep01aG0080700.1 Cone1ag0768 431459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0768 629 Pfam Exo70 exocyst complex subunit C-terminal 265 613 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cone1ag0768 629 Gene3D Exocyst complex component Exo70 73 623 - -
Cone1ag0768 629 FunFam Exocyst subunit Exo70 family protein 72 623 - -
Cone1ag0768 629 SUPERFAMILY Cullin repeat-like 79 615 IPR016159 -
Cone1ag0768 629 PANTHER EXOCYST COMPLEX PROTEIN EXO70 59 617 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cone1ag0768 629 Pfam Exocyst complex component Exo70 N-terminal 61 138 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag1017 Cone-Chr16:9851808 Cone1ag0768 Cone-Chr1:53788018 5.17E-115 dispersed
Cone1ag0768 Cone-Chr1:53788018 Cone2ag0024 Cone-Chr2:154176 7.41E-115 dispersed
Cone1ag0768 Cone-Chr1:53788018 Cone5ag1050 Cone-Chr5:4612611 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0768 K07195 - mdm:103412781 903.279