Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag0781 | ATGGCGAGTACCAATCTAGCAGCATTATCTTGCAACTACTTTCTCATGATCTTTGTTAGCAGCTTGCTCGTGGCTACTGCTGCGGCTTACGGTGAATGGCAGAGCGCTCATGCCACTTTCTACGGTGGCGGCGATGCATCGGGGACGATGGGAGGAGCATGCGGTTATGGAAATCTATACAGCCAAGGATACGGAACTAACACGGCAGCTCTCAGCACGGCCTTGTTCAACAACGGCTTAACCTGCGGTGCCTGTTTCGAAATGCGGTGCAATGCCGACCCCAAGTGGTGCCGCCCTGGTGCCACCACAACCGTTACGACAACTAACTTCTGCCCGCCCAACCCTTCCTTGCCCAACAACAACGGCGGCTGGTGCAACCCGCCTCTTCAGCACTTCGACTTAGCGGAACCGGCCTTCTTGCAGATTGCACAGTACCGTGCCGGGATTGTCCCCGTGTCGTACAGAAGAGTGCTGTGTGCCAAGAAAGGAGGGATCCGGTTCACGATCAATGGCCACTCTTACTTCAACCTAGTCATGATCAGTAATGTGGGTGGGGCTGGAGATGTTCATGCCGTTTCGGTCAAGGGGTCCAAGACCGGGTGGCAGCCCATGTCGAGGAATTGGGGCCAGAATTGGCAGAGCAACTCCTACCTTAACGGTCAGTCCCTGTCATTCCAAGTCACATCTAGTGATGGTAGGACCCTCACAAGTAACAACGTGGCGCCTGCTGGTTGGCAGTTTGGTCAAACATTCCAAGGTCTCCAATTTTAA | 771 | 54.22 | MASTNLAALSCNYFLMIFVSSLLVATAAAYGEWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLTCGACFEMRCNADPKWCRPGATTTVTTTNFCPPNPSLPNNNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSYRRVLCAKKGGIRFTINGHSYFNLVMISNVGGAGDVHAVSVKGSKTGWQPMSRNWGQNWQSNSYLNGQSLSFQVTSSDGRTLTSNNVAPAGWQFGQTFQGLQF | 256 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 53837989 | 53838845 | - | Conep01aG0082100.1 | Cone1ag0781 | 431472 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag0781 | 256 | Pfam | Lytic transglycolase | 68 | 154 | IPR009009 | - | |
Cone1ag0781 | 256 | PRINTS | Expansin signature | 175 | 196 | IPR002963 | GO:0009664(InterPro) | |
Cone1ag0781 | 256 | PRINTS | Expansin signature | 90 | 101 | IPR002963 | GO:0009664(InterPro) | |
Cone1ag0781 | 256 | PRINTS | Expansin signature | 122 | 139 | IPR002963 | GO:0009664(InterPro) | |
Cone1ag0781 | 256 | PRINTS | Expansin signature | 163 | 175 | IPR002963 | GO:0009664(InterPro) | |
Cone1ag0781 | 256 | PRINTS | Expansin signature | 210 | 231 | IPR002963 | GO:0009664(InterPro) | |
Cone1ag0781 | 256 | PRINTS | Expansin signature | 63 | 77 | IPR002963 | GO:0009664(InterPro) | |
Cone1ag0781 | 256 | PRINTS | Expansin signature | 239 | 255 | IPR002963 | GO:0009664(InterPro) | |
Cone1ag0781 | 256 | PRINTS | Expansin signature | 139 | 152 | IPR002963 | GO:0009664(InterPro) | |
Cone1ag0781 | 256 | PRINTS | Expansin signature | 103 | 113 | IPR002963 | GO:0009664(InterPro) | |
Cone1ag0781 | 256 | SMART | dpbb_1 | 68 | 154 | IPR007112 | - | |
Cone1ag0781 | 256 | Gene3D | - | 18 | 160 | IPR036908 | - | |
Cone1ag0781 | 256 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 51 | 164 | IPR007112 | - | |
Cone1ag0781 | 256 | PRINTS | Expansin/Lol pI family signature | 201 | 215 | IPR007118 | GO:0005576(InterPro) | |
Cone1ag0781 | 256 | PRINTS | Expansin/Lol pI family signature | 239 | 253 | IPR007118 | GO:0005576(InterPro) | |
Cone1ag0781 | 256 | PRINTS | Expansin/Lol pI family signature | 32 | 47 | IPR007118 | GO:0005576(InterPro) | |
Cone1ag0781 | 256 | PRINTS | Expansin/Lol pI family signature | 50 | 68 | IPR007118 | GO:0005576(InterPro) | |
Cone1ag0781 | 256 | PRINTS | Expansin/Lol pI family signature | 72 | 90 | IPR007118 | GO:0005576(InterPro) | |
Cone1ag0781 | 256 | PRINTS | Expansin/Lol pI family signature | 147 | 163 | IPR007118 | GO:0005576(InterPro) | |
Cone1ag0781 | 256 | FunFam | Expansin | 23 | 160 | - | - | |
Cone1ag0781 | 256 | SUPERFAMILY | Barwin-like endoglucanases | 32 | 182 | IPR036908 | - | |
Cone1ag0781 | 256 | PANTHER | EXPANSIN-A15 | 16 | 255 | IPR002963 | GO:0009664(InterPro) | |
Cone1ag0781 | 256 | Pfam | Expansin C-terminal domain | 165 | 242 | IPR007117 | - | |
Cone1ag0781 | 256 | Gene3D | - | 163 | 256 | IPR036749 | - | |
Cone1ag0781 | 256 | CDD | DPBB_EXPA_N | 32 | 159 | - | - | |
Cone1ag0781 | 256 | FunFam | Expansin | 164 | 256 | - | - | |
Cone1ag0781 | 256 | SUPERFAMILY | PHL pollen allergen | 161 | 253 | IPR036749 | - | |
Cone1ag0781 | 256 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 174 | 253 | IPR007117 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone15ag1061 | Cone-Chr15:8779097 | Cone1ag0781 | Cone-Chr1:53837989 | 5.63E-86 | dispersed | |
Cone18ag0813 | Cone-Chr18:5002561 | Cone1ag0781 | Cone-Chr1:53837989 | 2.81E-109 | dispersed | |
Cone18ag1249 | Cone-Chr18:8835827 | Cone1ag0781 | Cone-Chr1:53837989 | 7.79E-95 | dispersed | |
Cone1ag0781 | Cone-Chr1:53837989 | Cone5ag0142 | Cone-Chr5:611803 | 2.63E-147 | dispersed | |
Cone11ag0236 | Cone-Chr11:1143911 | Cone1ag0781 | Cone-Chr1:53837989 | 2.93E-94 | transposed | |
Cone1ag0781 | Cone-Chr1:53837989 | Cone1ag1621 | Cone-Chr1:57641927 | 9.09E-146 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag0781 | - | - | - | 0.0 |