Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone1ag0786 | ATGGCAATTCCTTTACTGGTCCCACACATGAACCTCCACGATGCGAAGCTCGACACTTATGATATTCCGGCAGAGAGCAAGATCTTGGTGAATGCATGGTGGCTTGCCAACAACCCTGCCCACTGGAAGAATCCGGAAGAGTTCCAACCAGAGAGGTTTTTTGAGGAGGAATCTAAGGTGGAGGCCAGTGGCAACGATTTTAGATACCTTCTGTTCGGCGTCGGAAGGAGGAGTTGCCTTGGAATAATCCTTGCTTTGCCAATCCTTGGCATTACGTTGGGCCATTTGGTGTAG | 294 | 49.66 | MAIPLLVPHMNLHDAKLDTYDIPAESKILVNAWWLANNPAHWKNPEEFQPERFFEEESKVEASGNDFRYLLFGVGRRSCLGIILALPILGITLGHLV | 97 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 53867549 | 53867842 | - | Conep01aG0082700.1 | Cone1ag0786 | 431477 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone1ag0786 | 97 | Gene3D | Cytochrome P450 | 1 | 97 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0786 | 97 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 1 | 97 | - | GO:0004497(PANTHER)|GO:0009808(PANTHER)|GO:0016710(PANTHER) | |
| Cone1ag0786 | 97 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 72 | 81 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone1ag0786 | 97 | PRINTS | E-class P450 group I signature | 79 | 97 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0786 | 97 | PRINTS | E-class P450 group I signature | 31 | 55 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0786 | 97 | PRINTS | E-class P450 group I signature | 69 | 79 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0786 | 97 | Pfam | Cytochrome P450 | 2 | 96 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0786 | 97 | SUPERFAMILY | Cytochrome P450 | 3 | 97 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone1ag0786 | Cone-Chr1:53867549 | Cone16ag0330 | Cone-Chr16:4189436 | 7.33E-38 | dispersed | |
| Cone1ag0786 | Cone-Chr1:53867549 | Cone5ag1037 | Cone-Chr5:4531339 | 1.00E-54 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone1ag0786 | K00487 | - | rcu:8282005 | 175.252 |