Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0787 ATGCGGTGGATCATGACCGTCCTGTTTTTCACCAACAAGGTGGTGCAACAGTACATGCACGGGTGGGAGGACGAGGCGGTGCGTGTGGTAGAAGATGTGAGGAAGAATCCGGAAGCGTCTCGGTCCGGGATCGTGCTGAGGAGGCGGTTGCAGCTAATGATGTACAACAACATGTACATGATTATGTTTGACAGAAGGTTCCAGAGTGAAGATCCATTGTTTAACAAGCTTAAGGCGCTTAACGGAGAGAGAAGTCGGTTGGCTCAGAGCTTTGACTACAACTATGGCGATTTCATTTCAATTCTGAGGCCATTTTTTAGAGGTTATCTTAAGATCTGTAAGGATGTTAAGGAGAGAAGGATTCAACTCTTCTAG 375 46.67 MRWIMTVLFFTNKVVQQYMHGWEDEAVRVVEDVRKNPEASRSGIVLRRRLQLMMYNNMYMIMFDRRFQSEDPLFNKLKALNGERSRLAQSFDYNYGDFISILRPFFRGYLKICKDVKERRIQLF 124
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53869225 53869599 - Conep01aG0082800.1 Cone1ag0787 431478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0787 124 Gene3D Cytochrome P450 1 124 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag0787 124 SUPERFAMILY Cytochrome P450 2 121 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag0787 124 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 124 - GO:0004497(PANTHER)|GO:0009808(PANTHER)|GO:0016710(PANTHER)
Cone1ag0787 124 Pfam Cytochrome P450 4 123 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0787 Cone-Chr1:53869225 Cone16ag0330 Cone-Chr16:4189436 3.04E-41 dispersed
Cone1ag0787 Cone-Chr1:53869225 Cone5ag1037 Cone-Chr5:4531339 6.98E-72 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0787 K00487 - vvi:100253493 203.371