Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag0790 | ATGCAAGAAAGTGGCAGGCCGATGACCCCAGATATAAATACTGAGAAAGCGGAGAACGTCAAATCAATGGCGGACGAAGATCAACATGATGTGAAGGATGAAGTTGCGGAAATTGCCCCTTTTGATCCTTCTAAGAAGAAGAAAAAGAAGAAGGTCGTAATCCAGGACCCTGCTGATGATTCTGTGGACAACTTGGCTGAGAAAACAGAAAGTTTGTCTGTTGCTGATGGGATTGATAGTTCATTTTCTGGCTTGAAAAAGAAGAAGAAGAAGCCTGTTGAAACAAGTACCTTGAATGATGAGAGTGGTGATCTAGGGGAAGATATAGATGATCAACCTGTGGAGGAGGAAGAAGGAGAAGGGATTGTCCTGCAGTCTCGTTATCCTTGGGAGGGAACTGATCGTGATTATGAATATGAGGAGCTTCTTGGTAGGGTGTTTAACATTCTCCGCGAGAATAATCCTGAGCTAGCAGGAGATAGGCGTAGGACAGTCATGAGGCCTCCCCAAGTTCTTCGTGAAGGCACGAAAAAAACTGTTTTTGTAAATTTCATGGATCTTTGCAAAACGTATGTTTGTTCTCTTTCTATCTTATCAGAGTATTTACTTATTAGCCTCTGTTATCAATGCATGATCGGACTCTATCTGCCTTTTGTGTGGTGTGTGGTGAGTTTCAGCCTTGTAGGCTTTTTGCTGAATTTTATATATCATTTTATCAACTTTCAGTTTTTTTTCAACCTCCTGAATTGA | 750 | 41.33 | MQESGRPMTPDINTEKAENVKSMADEDQHDVKDEVAEIAPFDPSKKKKKKKVVIQDPADDSVDNLAEKTESLSVADGIDSSFSGLKKKKKKPVETSTLNDESGDLGEDIDDQPVEEEEGEGIVLQSRYPWEGTDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTYVCSLSILSEYLLISLCYQCMIGLYLPFVWCVVSFSLVGFLLNFIYHFINFQFFFNLLN | 249 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 53882463 | 53886104 | - | Conep01aG0083100.1 | Cone1ag0790 | 431481 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag0790 | 249 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 46 | 209 | IPR045196 | GO:0001731(PANTHER)|GO:0001732(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0005850(PANTHER)|GO:0006413(InterPro)|GO:0031369(PANTHER) | |
Cone1ag0790 | 249 | MobiDBLite | consensus disorder prediction | 18 | 44 | - | - | |
Cone1ag0790 | 249 | MobiDBLite | consensus disorder prediction | 82 | 97 | - | - | |
Cone1ag0790 | 249 | SUPERFAMILY | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 136 | 212 | IPR016189 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cone1ag0790 | 249 | Gene3D | - | 134 | 213 | - | - | |
Cone1ag0790 | 249 | MobiDBLite | consensus disorder prediction | 1 | 121 | - | - | |
Cone1ag0790 | 249 | MobiDBLite | consensus disorder prediction | 52 | 66 | - | - | |
Cone1ag0790 | 249 | MobiDBLite | consensus disorder prediction | 101 | 118 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag0790 | Cone-Chr1:53882463 | Cone5ag1035 | Cone-Chr5:4513886 | 4.40E-105 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag0790 | K03238 | - | vvi:100263785 | 276.559 |