Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0800 ATGCCAGTTCTTGTGTCTCTTCCTAGTGGTGGATTACGAGCATTCTGCAAAGGAGCATCAGAAATAATTATGTCCATGTGTGGGAAGGTTCTTAATTCGAAAGGCGAATCATTCCCTCTCTCTGAAGAACAGAGAAATAAGATAACTGATATCATAACTGGTTTTGCTTCTGAGGCTTTAAGAACTCTATGCTTGGCTTATAGAGACGTAGAAGATTCTACAAAGGTAGATTCTATTCCGGAGGATAGCTATACGTTGATAGCCGTTATAGGAATCAAGGATCCGGTATGCCCAGGAGTAAAGGATGCCGTAAAGACGTGTTTGGCTGCAGGGATTACTGTAAGAATGGTGACTGGTGATAATATTCATACAGCTAAAGCCATAGCTAGAGAGTGTGTCATCTTGACCGAAGACGGTTTAGCAATTGAAGGGCCGGATTTCCGGAATAAAACCTCCATTTTGAGTTAA 468 41.67 MPVLVSLPSGGLRAFCKGASEIIMSMCGKVLNSKGESFPLSEEQRNKITDIITGFASEALRTLCLAYRDVEDSTKVDSIPEDSYTLIAVIGIKDPVCPGVKDAVKTCLAAGITVRMVTGDNIHTAKAIARECVILTEDGLAIEGPDFRNKTSILS 155
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53923275 53923742 - Conep01aG0084100.1 Cone1ag0800 431491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0800 155 PANTHER CATION TRANSPORTING ATPASE 3 151 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Cone1ag0800 155 Pfam haloacid dehalogenase-like hydrolase 80 133 - -
Cone1ag0800 155 Gene3D - 1 92 IPR023299 GO:0000166(InterPro)
Cone1ag0800 155 SUPERFAMILY HAD-like 84 147 IPR036412 -
Cone1ag0800 155 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 2 100 IPR023299 GO:0000166(InterPro)
Cone1ag0800 155 Gene3D - 93 152 IPR023214 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0800 Cone-Chr1:53923275 Cone6ag1463 Cone-Chr6:11673578 7.16E-56 dispersed
Cone1ag0800 Cone-Chr1:53923275 Cone5ag1028 Cone-Chr5:4484233 1.25E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0800 K01537 - vvi:100246545 231.876