Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0801 ATGATTCAAGTCACTAGAGACGGATCGAGACAGAAGGTTTCGATTTACGATTTAGTAGTTGGAGATCTAGTGCATTTAGGTCTAGGAGATCAAGTTCCGGCTGATGGAATTTTCATATCAGGCTATAGTTTACAAATCGACGAGTCAAGCTTGTTAGGTGAGAGCGAGCCCGTCGATGTGAGCCAAGAGAGACCATTTCTCTTATCAGGGACCAAAGTGCAAGATGGGTCCGGTAAAATGCTCGTGACAACTGTTGGAATGAGGACCGAATGGGGAAGGTTAATGTTCCCTTTGAGTGAAGGAGGAGATGATGAGACACCACTTCAAGTCAAGCTCAATGGAGTCGCGACTATCATCGGAAAAATTGGTTTGGCTTTTGCCATAATGACTTTTTTCGTCTGGGTGACAAGATTTCTTGTGGATAAAGCAATCGCCAATCAGATCATGGAGTTGTCTTCAAGGGATGCATTGACACCTTTGAATTACTTTGCTATTGCTGTTATTATAGTTGTGGTAGCGGTTCCAGAAGGATTGCCCCTAGCCGTACCGATAAGTCTTGCCATTGCCATGAAGAAATTGATGAAGGATAAGGCTCTTGTAAGGCATCATCTGCTTGTGAGACAATGGGTTCGGCTCATTGTATTTGCACGGATAAAGAAGATATATTGA 669 43.35 MIQVTRDGSRQKVSIYDLVVGDLVHLGLGDQVPADGIFISGYSLQIDESSLLGESEPVDVSQERPFLLSGTKVQDGSGKMLVTTVGMRTEWGRLMFPLSEGGDDETPLQVKLNGVATIIGKIGLAFAIMTFFVWVTRFLVDKAIANQIMELSSRDALTPLNYFAIAVIIVVVAVPEGLPLAVPISLAIAMKKLMKDKALVRHHLLVRQWVRLIVFARIKKIY 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53923959 53924627 - Conep01aG0084200.1 Cone1ag0801 431492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0801 222 Gene3D - 82 204 - -
Cone1ag0801 222 FunFam Calcium-transporting ATPase 1 99 - -
Cone1ag0801 222 SUPERFAMILY Calcium ATPase, transmembrane domain M 99 202 IPR023298 -
Cone1ag0801 222 SUPERFAMILY Calcium ATPase, transduction domain A 2 94 IPR008250 -
Cone1ag0801 222 PANTHER CATION TRANSPORTING ATPASE 2 202 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Cone1ag0801 222 Pfam E1-E2 ATPase 3 195 - -
Cone1ag0801 222 Gene3D - 1 81 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0801 Cone-Chr1:53923959 Cone4ag1612 Cone-Chr4:12258704 7.37E-84 dispersed
Cone1ag0801 Cone-Chr1:53923959 Cone5ag1028 Cone-Chr5:4484233 2.42E-112 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0801 K01537 - mdm:103438470 313.538