Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone1ag0804 | ATGCAGCAGAACTCACGGACCATGCCTTCTTTCAAGTCGATAAAATCATTACCAGTTGATTACCAATTCAGGGGATCATCAACCTCTGATCATTTGGTTACTGAGGAAAATGGTGTTTATGATGATAAGCCTGTTGTTGGAATTGAGAATTGTGTTGCCCATGCTGATCAAGTTAATGAGGATTCCCCATACGTTGGTAATATGATGTTGGTTGAAGACAGACCTGCTATGCGTGATGAAGACTCTGCTTCTGTGGCTTTGCCTTCTCCTTCAATCTCTAGCTCACGCAATGAGCACAGATGGGGTGACACTTCCTATTATGCAATGAAGAAGATGATTAATTCTTGGTTTCAACTTCCAAATGGGACTTTGGAGCTGGTTAAAATATTATCAACTTCAGGAATAGAGTCTGTTGTTTCACTTCCTGATGGGAAGGTTTTAAAGGTAAAAACTGAAAGTTTGCTACCAGCAAATCCTGACATCCTAGATGGTGTAGATGATCTGATGCAGCTTAGTTATTTAAACGAGCCGTCAGTGTTACACAATCTTCAGTACAGATACAATCAAGATATGATTTATACAAAAGCTGGACCTGTATTGGTTGCTGTCAACCCTTTTAAGAAAGTTCCCTTGTACGGAAATGATTTCATCGAAGCATATAAACATAAATCTGTGGAGAGTCCGCATGTATATGCCATTACAGATACAGCCATCCGAGAAATGGTCCGAGATGAAGTAAATCAATCTATCATTATAAGTGGTGAAAGTGGAGCAGGAAAAACTGAAACAGCAAAGATAGCAATGCAGTATTTGGCCGCCCTTGGTGGTGGAAGTGGGATAGAGTATGAAATATTGAAAACAAATCCGATCTTAGAAGCCTTTGGCAATGCAAAAACATTGAGAAATGACAACTCAAGTCGCTTTGGAAAATTGATTGAAATCCACTTCAGTGAAACAGGAAAAATATCTGGTGCCAATATTCAAACTTTTTTGCTTGAGAAGTCTAGAGTGGTCCAGTGCATGGAGGGTGAAAGGTCATATCATATATTTTACCAGCTCTGTGCTGGAGCTCCATCTGCTCTTAGAGAGATGCTTAATTTGAAGAGTGCAGATGAGTACAAGTATCTGAGGCAGATGAATTGTTATTCAATTACTGGGGTTGATGATGCTGATCAATTTCGTATAGTCAGGGAAGCTCTAGATGTTGTGCATATCAGCAAAGAGGACCAAGAAAGTGTATTTTCTGTGCTTGCTGCTGTGCTGTGGCTGGGAAATGTGTCGTTTGCTGACAATGAGAACCATGTTGAAGCTGTGGCTGATGAATGTCTATCTTCAGTTGCTAAACTGCTTGGATGTAATGTTGAGGAACTTAATCTAGCTTTAACCACTCGAAAAATGACAGTCAGAAATGAGGATATCGTCCAAAAGCTTACACTACCACAAGCGATAGATGCAAGAGATGCTTTGGCGAAGTATATTTATGCTTGTCTGTTTGAGTGGCTGGTTGAACAAATCAACAAATCTCTTGCTGTAGGGAAACGGCGTACTGGCAGATCCATCAGCATTCTTGATATCTATGGCTTTGAATCATTTGAAAGGAACAGTTTTGAACAATTCTGCATTAACTATGCAAATGAAAGATTGCAGCAACATTTCAATCGTCATTTATTCAAGCTGGAGCAGGAGGAATACATCCAAGATGGTATCGACTGGGCAAAAGTAGATTTTGATGATAACCAGGACTGCCTCGGCCTTTTTGAAAAGAAACCTTTGGGATTGCTGTCCCTGCTAGATGAGGAGTCCACTTTCCCAAATGGCACAGATTTAACCTTTGCCAACAAGCTTAAGCAGCATTTGAACTCTAATTCTTGTTTCAGAGGAGAAAGAGGTCAAGGCTTTACTGTTAGTCATTATGCGGGAGAGGTTACATATGACACAACTGGATTTCTGGAGAAAAACAGGGACTTACTGCACCTAGATTCCATTCAACTTCTATCTTCATGCTCATACCACCTTCCTCAGAAATTTGCTGCTGGCATGCTTGATCATTCCAAAAAATCTGTCACTGGACCTTTACATAAATCTGGTGGTGCAGATTCCCAAAAGCTAAGTGTAGCAACAAAATTTAAGGGTCAATTGTTCCAGTTGTTGCTACGTCTAGAGAATACTACACCGCATTTCATACGATGTATCAAGCCAAACAATCTTAAATCTCCTGGGTTATACGAGCAAGAGCTTGTACTGCAGCAGTTGAGATGCTGTGGCGTCTTAGAGGTAGTTCGGATATCAAGATCAGGATTTCCTACCAGAATGACTCACCAAAAGTTTGCCAGAAGGTATGGATTTCTCCTACTGGAGAGTGTCGCTTCTCAGGATCCATTGAGTGTTTCAGTTGCAATTCTTCACCAATTCAATATATTGCCAGACATGTATCAAGTTGGCTATACAAAATTATTCTTCCGAACTGGACAGATGGGGGCGCTTGAAGATACAAGAAACCGCACCCTCCATGGCATCTTATGTGTTCAAAGCTGCTTCAGGGGGTACCAAGCTCGCTGCCACCTCAAGGAGCTGAGTCGAGGAATCACTACTCTTCAGTCATTTATACGTGGAGTAAACATGAGAAAGGAGTATGCAATCTTACTTGAGAGACACAGAGCTGCTATTAAAATACAGAAGGGGATTAAAGGCAGAGTTTTAAGAAACCAGTTCAAGGATACTTGTTATGCATCAGTCACAATTCAATCAGTCATTCGTGGCTGGTTGGTAAGAAGGTGCTCAGGAAATATAGGATCACTGATATCTGTGGAAAAAAAGGTAAATGAGTCGGATGATGTCCTTGTGAAGTCGTCATTCCTTGCAGAATTACAACGCAGAGTTCTTAAGGCTGAGGCTGGTTTCAGAGAGAAAGAAGAAGAGAATGAGATCCTACACCAACGCCTCCAACAGTATGATAACCGCTGGTCAGAATACGAGCTGAAAATGAAGTCAATGGAAGAAGTATGGCAGAAGCAGATGAGATCACTACAATCCAGTCTCTCCATTGCAAAGAAGAGCTTAGCAGTTGATGATTCTGCAAGAAGTTCCGATGCATCTGTAAATGCAAGTGAAGAAAAAGAGTACAGCTGGGAAATAGAAAGTAAAAATACTAAAGAGAGCAATGGGATGAGACCAATGAGTGCAGGGCTTAGTGTTATAAGCCGATTGGCGGAAGAATTCGAGCAGAGGAGTCAAGTATTTGGCGACGATGCAAAATTCTTAGTAGAGGTTAAGTCTGGGGAGGTTGAAGCAAGTCTTGATCCAGATAAGGAACTCAGAAGATTGAAACAGATTTTCGAAGGCTGGAAGAAGGATTATGCTGTGAGACTACGTGAAACAAAGGTGATTTTAAACAGGCTTGGCACTGAAAACTCAGGTGACAAGGCGAAAAAGACATGGTGGGGCAGGTTAAACAGCTCAAGGATTAATTAA | 3471 | 41.14 | MQQNSRTMPSFKSIKSLPVDYQFRGSSTSDHLVTEENGVYDDKPVVGIENCVAHADQVNEDSPYVGNMMLVEDRPAMRDEDSASVALPSPSISSSRNEHRWGDTSYYAMKKMINSWFQLPNGTLELVKILSTSGIESVVSLPDGKVLKVKTESLLPANPDILDGVDDLMQLSYLNEPSVLHNLQYRYNQDMIYTKAGPVLVAVNPFKKVPLYGNDFIEAYKHKSVESPHVYAITDTAIREMVRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCMEGERSYHIFYQLCAGAPSALREMLNLKSADEYKYLRQMNCYSITGVDDADQFRIVREALDVVHISKEDQESVFSVLAAVLWLGNVSFADNENHVEAVADECLSSVAKLLGCNVEELNLALTTRKMTVRNEDIVQKLTLPQAIDARDALAKYIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFERNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFDDNQDCLGLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFRGERGQGFTVSHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCSYHLPQKFAAGMLDHSKKSVTGPLHKSGGADSQKLSVATKFKGQLFQLLLRLENTTPHFIRCIKPNNLKSPGLYEQELVLQQLRCCGVLEVVRISRSGFPTRMTHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPDMYQVGYTKLFFRTGQMGALEDTRNRTLHGILCVQSCFRGYQARCHLKELSRGITTLQSFIRGVNMRKEYAILLERHRAAIKIQKGIKGRVLRNQFKDTCYASVTIQSVIRGWLVRRCSGNIGSLISVEKKVNESDDVLVKSSFLAELQRRVLKAEAGFREKEEENEILHQRLQQYDNRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAVDDSARSSDASVNASEEKEYSWEIESKNTKESNGMRPMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGEVEASLDPDKELRRLKQIFEGWKKDYAVRLRETKVILNRLGTENSGDKAKKTWWGRLNSSRIN | 1156 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 53956245 | 53967467 | - | Conep01aG0084700.1 | Cone1ag0804 | 431495 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone1ag0804 | 1156 | Gene3D | - | 345 | 404 | - | - | |
| Cone1ag0804 | 1156 | ProSiteProfiles | IQ motif profile. | 909 | 935 | - | - | |
| Cone1ag0804 | 1156 | Coils | Coil | 953 | 987 | - | - | |
| Cone1ag0804 | 1156 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 137 | 881 | IPR027417 | - | |
| Cone1ag0804 | 1156 | FunFam | Myosin heavy chain | 345 | 401 | - | - | |
| Cone1ag0804 | 1156 | Pfam | IQ calmodulin-binding motif | 839 | 856 | IPR000048 | GO:0005515(InterPro) | |
| Cone1ag0804 | 1156 | Pfam | IQ calmodulin-binding motif | 885 | 905 | IPR000048 | GO:0005515(InterPro) | |
| Cone1ag0804 | 1156 | Pfam | IQ calmodulin-binding motif | 860 | 878 | IPR000048 | GO:0005515(InterPro) | |
| Cone1ag0804 | 1156 | Pfam | IQ calmodulin-binding motif | 910 | 925 | IPR000048 | GO:0005515(InterPro) | |
| Cone1ag0804 | 1156 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 406 | 701 | - | - | |
| Cone1ag0804 | 1156 | ProSiteProfiles | IQ motif profile. | 858 | 887 | - | - | |
| Cone1ag0804 | 1156 | Gene3D | - | 886 | 928 | - | - | |
| Cone1ag0804 | 1156 | Gene3D | - | 837 | 885 | - | - | |
| Cone1ag0804 | 1156 | SMART | MYSc_2a | 157 | 834 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone1ag0804 | 1156 | Gene3D | - | 529 | 723 | - | - | |
| Cone1ag0804 | 1156 | CDD | MYSc_Myo8 | 177 | 821 | IPR036022 | - | |
| Cone1ag0804 | 1156 | ProSiteProfiles | IQ motif profile. | 884 | 913 | - | - | |
| Cone1ag0804 | 1156 | ProSiteProfiles | Myosin motor domain profile. | 163 | 833 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone1ag0804 | 1156 | ProSiteProfiles | IQ motif profile. | 837 | 864 | - | - | |
| Cone1ag0804 | 1156 | Gene3D | Kinesin motor domain | 166 | 762 | IPR036961 | - | |
| Cone1ag0804 | 1156 | PANTHER | MYOSIN | 154 | 1128 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Cone1ag0804 | 1156 | SMART | iq_5 | 906 | 928 | IPR000048 | GO:0005515(InterPro) | |
| Cone1ag0804 | 1156 | SMART | iq_5 | 883 | 905 | IPR000048 | GO:0005515(InterPro) | |
| Cone1ag0804 | 1156 | SMART | iq_5 | 834 | 856 | IPR000048 | GO:0005515(InterPro) | |
| Cone1ag0804 | 1156 | SMART | iq_5 | 857 | 879 | IPR000048 | GO:0005515(InterPro) | |
| Cone1ag0804 | 1156 | FunFam | Unconventional myosin-XIX | 531 | 723 | - | - | |
| Cone1ag0804 | 1156 | Gene3D | - | 766 | 834 | - | - | |
| Cone1ag0804 | 1156 | Pfam | Myosin head (motor domain) | 165 | 821 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone1ag0804 | 1156 | PRINTS | Myosin heavy chain signature | 193 | 212 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone1ag0804 | 1156 | PRINTS | Myosin heavy chain signature | 289 | 316 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone1ag0804 | 1156 | PRINTS | Myosin heavy chain signature | 572 | 600 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone1ag0804 | 1156 | PRINTS | Myosin heavy chain signature | 247 | 272 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone1ag0804 | 1156 | PRINTS | Myosin heavy chain signature | 519 | 547 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone1ag0804 | Cone-Chr1:53956245 | Cone6ag0113 | Cone-Chr6:541407 | 0 | dispersed | |
| Cone1ag0804 | Cone-Chr1:53956245 | Cone5ag1023 | Cone-Chr5:4441363 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone1ag0804 | - | - | - | 0.0 |