Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag0862 | ATGGCGAACCCATGGTGGGCCGGTAGTCAGCTCGGTCTACCGGCTGGAGTAGACGCTAATACTCCAACCAGCTCATCCTCCATGAAGAAACCAGATCTAGGAATCTCCATCATGAACGATTTCAGCCGAAACCCTAGCGCTAACGATGATGAGGAAGAAGAGGAGGACAGAGATCAGCACAACAACGAGTCGAAGGATGGTGCAATCGTGCTGGGGACGCGCCGGCCCAGAGGGCGTCCGTCCGGTTCGAAAAACAAGCCGAAACCGCCCATCTTCGTCACGAGGGATAGCCCTAATGCTCTCAAGAGCCATGTCATGGAGATATCAAACGGTGCGGATGTGGCGGAAAGTGTGGCCCACTTCGCCAGGAAGAGACAGAGAGGTGTGTGTTTACTCAGCGCGAGCGGAGCGGTCTCGAACGTTACGCTTCAGCAACCGTCAGCTCCCGGTGCAGTTATGGCTCTCCATGGCCGGTTTGAGATTCTTTCTTTAACCGGGTCGTTCTTGCCTGGACCGGCTCCACCTGGGTCCACAGGACTAACCATTTACTTAGCTGGCGGGCAGGGTCAGGTGGTGGGGGGGAGTGTGGTGGGTCAGCTAATTGCGTCAGGGCCTGTTATGGTGATTGCCGCTACGTTTTCTAATGCGACGTATGAAAGACTGCCGTTGGAAAGTGAAGAAGAAGCAGCAGGTGGTGGGCTAGGAATAGGGTCAGGGAGTGCTGGGGGTGGAGACGGTGGTGGTGGCGGTTCAGAGGGCGGATCTCCGACTGGGATTGGTGGTACTAGATTGTCCGGCGACCCTGGATCCTTACAAGGGTATAACTTACCACCAAATTTGCTACCAAATGGTGGACAGTTGAGTCATGAATCTTATTCTTGGGCTCATGTAGGCGGCCGGCCGCCATATTAG | 912 | 55.26 | MANPWWAGSQLGLPAGVDANTPTSSSSMKKPDLGISIMNDFSRNPSANDDEEEEEDRDQHNNESKDGAIVLGTRRPRGRPSGSKNKPKPPIFVTRDSPNALKSHVMEISNGADVAESVAHFARKRQRGVCLLSASGAVSNVTLQQPSAPGAVMALHGRFEILSLTGSFLPGPAPPGSTGLTIYLAGGQGQVVGGSVVGQLIASGPVMVIAATFSNATYERLPLESEEEAAGGGLGIGSGSAGGGDGGGGGSEGGSPTGIGGTRLSGDPGSLQGYNLPPNLLPNGGQLSHESYSWAHVGGRPPY | 303 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 54339575 | 54340486 | - | Conep01aG0090500.1 | Cone1ag0862 | 431553 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag0862 | 303 | CDD | DUF296 | 102 | 185 | IPR005175 | - | |
Cone1ag0862 | 303 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 103 | 214 | IPR005175 | - | |
Cone1ag0862 | 303 | Gene3D | - | 102 | 229 | - | - | |
Cone1ag0862 | 303 | MobiDBLite | consensus disorder prediction | 276 | 290 | - | - | |
Cone1ag0862 | 303 | MobiDBLite | consensus disorder prediction | 1 | 96 | - | - | |
Cone1ag0862 | 303 | PIRSF | ESCAROLA | 15 | 303 | IPR014476 | GO:0003680(InterPro) | |
Cone1ag0862 | 303 | MobiDBLite | consensus disorder prediction | 16 | 32 | - | - | |
Cone1ag0862 | 303 | MobiDBLite | consensus disorder prediction | 226 | 303 | - | - | |
Cone1ag0862 | 303 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 40 | 303 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cone1ag0862 | 303 | FunFam | AT-hook motif nuclear-localized protein | 101 | 228 | - | - | |
Cone1ag0862 | 303 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 99 | 227 | - | - | |
Cone1ag0862 | 303 | ProSiteProfiles | PPC domain profile profile. | 98 | 237 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0652 | Cone-Chr10:3143000 | Cone1ag0862 | Cone-Chr1:54339575 | 2.76E-128 | dispersed | |
Cone1ag0862 | Cone-Chr1:54339575 | Cone3ag0681 | Cone-Chr3:3469813 | 2.40E-129 | dispersed | |
Cone1ag0862 | Cone-Chr1:54339575 | Cone5ag0555 | Cone-Chr5:2375683 | 6.76E-181 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag0862 | - | - | - | 0.0 |