Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0862 ATGGCGAACCCATGGTGGGCCGGTAGTCAGCTCGGTCTACCGGCTGGAGTAGACGCTAATACTCCAACCAGCTCATCCTCCATGAAGAAACCAGATCTAGGAATCTCCATCATGAACGATTTCAGCCGAAACCCTAGCGCTAACGATGATGAGGAAGAAGAGGAGGACAGAGATCAGCACAACAACGAGTCGAAGGATGGTGCAATCGTGCTGGGGACGCGCCGGCCCAGAGGGCGTCCGTCCGGTTCGAAAAACAAGCCGAAACCGCCCATCTTCGTCACGAGGGATAGCCCTAATGCTCTCAAGAGCCATGTCATGGAGATATCAAACGGTGCGGATGTGGCGGAAAGTGTGGCCCACTTCGCCAGGAAGAGACAGAGAGGTGTGTGTTTACTCAGCGCGAGCGGAGCGGTCTCGAACGTTACGCTTCAGCAACCGTCAGCTCCCGGTGCAGTTATGGCTCTCCATGGCCGGTTTGAGATTCTTTCTTTAACCGGGTCGTTCTTGCCTGGACCGGCTCCACCTGGGTCCACAGGACTAACCATTTACTTAGCTGGCGGGCAGGGTCAGGTGGTGGGGGGGAGTGTGGTGGGTCAGCTAATTGCGTCAGGGCCTGTTATGGTGATTGCCGCTACGTTTTCTAATGCGACGTATGAAAGACTGCCGTTGGAAAGTGAAGAAGAAGCAGCAGGTGGTGGGCTAGGAATAGGGTCAGGGAGTGCTGGGGGTGGAGACGGTGGTGGTGGCGGTTCAGAGGGCGGATCTCCGACTGGGATTGGTGGTACTAGATTGTCCGGCGACCCTGGATCCTTACAAGGGTATAACTTACCACCAAATTTGCTACCAAATGGTGGACAGTTGAGTCATGAATCTTATTCTTGGGCTCATGTAGGCGGCCGGCCGCCATATTAG 912 55.26 MANPWWAGSQLGLPAGVDANTPTSSSSMKKPDLGISIMNDFSRNPSANDDEEEEEDRDQHNNESKDGAIVLGTRRPRGRPSGSKNKPKPPIFVTRDSPNALKSHVMEISNGADVAESVAHFARKRQRGVCLLSASGAVSNVTLQQPSAPGAVMALHGRFEILSLTGSFLPGPAPPGSTGLTIYLAGGQGQVVGGSVVGQLIASGPVMVIAATFSNATYERLPLESEEEAAGGGLGIGSGSAGGGDGGGGGSEGGSPTGIGGTRLSGDPGSLQGYNLPPNLLPNGGQLSHESYSWAHVGGRPPY 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 54339575 54340486 - Conep01aG0090500.1 Cone1ag0862 431553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0862 303 CDD DUF296 102 185 IPR005175 -
Cone1ag0862 303 Pfam Plants and Prokaryotes Conserved (PCC) domain 103 214 IPR005175 -
Cone1ag0862 303 Gene3D - 102 229 - -
Cone1ag0862 303 MobiDBLite consensus disorder prediction 276 290 - -
Cone1ag0862 303 MobiDBLite consensus disorder prediction 1 96 - -
Cone1ag0862 303 PIRSF ESCAROLA 15 303 IPR014476 GO:0003680(InterPro)
Cone1ag0862 303 MobiDBLite consensus disorder prediction 16 32 - -
Cone1ag0862 303 MobiDBLite consensus disorder prediction 226 303 - -
Cone1ag0862 303 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 40 303 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cone1ag0862 303 FunFam AT-hook motif nuclear-localized protein 101 228 - -
Cone1ag0862 303 SUPERFAMILY AF0104/ALDC/Ptd012-like 99 227 - -
Cone1ag0862 303 ProSiteProfiles PPC domain profile profile. 98 237 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0652 Cone-Chr10:3143000 Cone1ag0862 Cone-Chr1:54339575 2.76E-128 dispersed
Cone1ag0862 Cone-Chr1:54339575 Cone3ag0681 Cone-Chr3:3469813 2.40E-129 dispersed
Cone1ag0862 Cone-Chr1:54339575 Cone5ag0555 Cone-Chr5:2375683 6.76E-181 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0862 - - - 0.0