Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone1ag0927 | ATGGAGACATGGTTTCTCATCCTTATCTCTCTCCTGCTCGCTCTCCTCCTCAAACCCCTTTTCGTCAACCTCTTCTTCCCCTCTAAGCTTCCACCTGGTCCCACCGTCATCCCAATCATCACCCCCATCATCTGGCTAAGCAAATCCCCCACCCAAATCGAAGCCATCATAAAAAACCTCCAATCCAAGTACGGCCCACTCGTCTCACTCCAAATCGGACCACGGCCCGCTATCTTCATCTCCGACCGCTCCGTAGCCCACAAAGCATTAGTCCAAAACGGCGCCATCTTCGCCGACCGTCCGACCGTCCGGGAAACCAACAGAATTCTCAGCAGCAACCAGCACACTATCAACTCCGCCCCTTACGGCCCCACCTGGCGCCTCCTCCGCCGCAACCTCACCGCCGAGATCCTCCACCCTTCTCGGGTCAGATCCTATACTCATGCCCGAAAATGGGTCCTGGACATCCTCCTGACCCGGTTAAAATCCCACTCTCACAAACATGGGCCGGTCTCTGTTATAGACAACTTTCAATACGCCATGTTCTGCTTACTGGTCCTGATGTGCTTCGGCGATAAGCTCGGCGACGAACAGATCAAAGAGATCGAAGAAGTTCAACGGCGAGTGCTTTTGAACTCCGGAATCTTCAACATTTTGAATTTCTGGCCGCGATTGACGAAGATTATATTCCAAAACCGTTGGGAAAAGCTGTTCCGACTGAAAAATGACCAAATCAGAGTGTTAGACCATTTGATTGAAGCTCGAAAGAAGTTGAAGAAAGAAAAGTCGGACATTAAAGAAGAGTTCGTCTTGTCTTATGTCGATACTTTGCTTGATCTAGAGCTTCCAGACGAGAAGAGAAAGCTCAATAAGGACGAGATGGTGTCTTTATGCTCCGAGTTTCTCAACGCGGGAACTGATACTACTTCTACTGCTCTGCAGTGGATAATGGCGAATTTAGTGAAATATCCAGAAATTCAAAACAGGGTTCTTGAGGAGATTAGAGAGGTTTTAGGAGAGGGAGAGAAGGAGGTGAAGGAAGAAGATCTAGGGAAACTTCCATATCTAAAAGCTGTGGTTTTAGAAGGCTTGAGAAGGCACCCACCAGGGCATTTCGTTCTTCCACATGCAGTAACAGAAGATGTGGTCTTAGAAGGTTACGTGATACCCAAGAAAGGGTCGGTGAATTTCATGGTGGCGGAGATGGGGTGGGACCCAAAGGTGTGGGAAGATCCTATGGCTTTTAATCCCGAGAGGTTTTTGTGCAGCGATGGGGGCGAAGTGGTTGATATAACAGGGAGTAAGGAGATAAAGATGATGCCGTTCGGAGTTGGGAGGAGGATCTGTCCTGGTCATGGTTTGGCGATGCTTCATTTGGAGTACTTTGTGGCCAATCTGGTTTGGAATTTTGAGTGGAAGAGTGGTGATGGCGTCGAGGTTGATCTGTCTGAGAAGGTCGAGTTCACCGTAGTTATGAAGAATCCATTGCGGGCCTACATTCGTCCAAGATTTTAG | 1515 | 48.78 | METWFLILISLLLALLLKPLFVNLFFPSKLPPGPTVIPIITPIIWLSKSPTQIEAIIKNLQSKYGPLVSLQIGPRPAIFISDRSVAHKALVQNGAIFADRPTVRETNRILSSNQHTINSAPYGPTWRLLRRNLTAEILHPSRVRSYTHARKWVLDILLTRLKSHSHKHGPVSVIDNFQYAMFCLLVLMCFGDKLGDEQIKEIEEVQRRVLLNSGIFNILNFWPRLTKIIFQNRWEKLFRLKNDQIRVLDHLIEARKKLKKEKSDIKEEFVLSYVDTLLDLELPDEKRKLNKDEMVSLCSEFLNAGTDTTSTALQWIMANLVKYPEIQNRVLEEIREVLGEGEKEVKEEDLGKLPYLKAVVLEGLRRHPPGHFVLPHAVTEDVVLEGYVIPKKGSVNFMVAEMGWDPKVWEDPMAFNPERFLCSDGGEVVDITGSKEIKMMPFGVGRRICPGHGLAMLHLEYFVANLVWNFEWKSGDGVEVDLSEKVEFTVVMKNPLRAYIRPRF | 504 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 54679768 | 54681561 | - | Conep01aG0097000.1 | Cone1ag0927 | 431618 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone1ag0927 | 504 | FunFam | Cytochrome P450 family protein | 26 | 504 | - | - | |
| Cone1ag0927 | 504 | PRINTS | P450 superfamily signature | 449 | 460 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0927 | 504 | PRINTS | P450 superfamily signature | 304 | 321 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0927 | 504 | PRINTS | P450 superfamily signature | 440 | 449 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0927 | 504 | PRINTS | P450 superfamily signature | 358 | 369 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0927 | 504 | SUPERFAMILY | Cytochrome P450 | 31 | 503 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0927 | 504 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 442 | 451 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone1ag0927 | 504 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0927 | 504 | PRINTS | E-class P450 group I signature | 357 | 375 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0927 | 504 | PRINTS | E-class P450 group I signature | 398 | 422 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0927 | 504 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0927 | 504 | PRINTS | E-class P450 group I signature | 313 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0927 | 504 | PRINTS | E-class P450 group I signature | 449 | 472 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0927 | 504 | PRINTS | E-class P450 group I signature | 293 | 310 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0927 | 504 | PRINTS | E-class P450 group I signature | 439 | 449 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0927 | 504 | Coils | Coil | 248 | 268 | - | - | |
| Cone1ag0927 | 504 | Pfam | Cytochrome P450 | 31 | 494 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0927 | 504 | CDD | CYP77_89 | 63 | 497 | - | - | |
| Cone1ag0927 | 504 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 14 | 502 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Cone1ag0927 | 504 | Gene3D | Cytochrome P450 | 27 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone1ag0927 | Cone-Chr1:54679768 | Cone2ag0385 | Cone-Chr2:2030918 | 3.92E-147 | dispersed | |
| Cone1ag0926 | Cone-Chr1:54677346 | Cone1ag0927 | Cone-Chr1:54679768 | 4.20E-132 | tandem | |
| Cone1ag0927 | Cone-Chr1:54679768 | Cone1ag0928 | Cone-Chr1:54682059 | 2.78E-239 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone1ag0927 | K24184 | - | cit:102610414 | 667.537 |