Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone1ag0928 | ATGGAGCTCACCTGGTTTCTTATCGCCATCTTCACTCCTCTGTTCATCCTCAAGCTTTTCTCCTCCTCCTCCACCACAAAACTCCCACCAGGCCCTACTTCTATCCCCATCATCAGTGACCTGTTATGGATTCGCAAATCCTTCTCGGATCTTGAGCCCATCCTCCGCAACTTCCATGCCAAGTATGGCCCGGTCGTCACCCTCCGCATCGGCCCACTCCCTGCAGTCTTCATAGCCGACCGCTCTCTCGCCCATAAGGCCCTGGTTCAAAACGGTGCTGTTTTCGCTGATCGTCCTCCGGCTTTCGCTATAGATGAGATAGTCAGTAGCAGCCAGCACACCATAAACACAGCCTTCTACGGCCCCAGATGGCGGCTCCTCCGCCGTAACCTCACGGCGGAGATCCTCCATCCTTTTCGAATCAAATCCTACTCTCACGCACGAAAATGGGTCCTTGAGATTCTCATAAATCGCCTGCGAGATCAATCTCGCCACCATGTTCGAGTCATCGATCATTTCCATTACGCCATGTTTTGCTTGCTCGTCTTCATGTGTTTTGGTGATAAGGTCGAGGAAACTCAAGTCAGAGAAATCGAGAAAGTTCAGCGTGAGTATCTAGTGAACTTCAATCGTTTCAATGTGTTAAATTTCTTCCCAAGCCTGACCAAGATATTTCTAAGAAAGCGTTGGAAGGAGTTCTTAACCTTGCAGAAGAACAAACGGGACGTCTTTATTCCTTTCATTGAAGCGAGAAGGAAAGCCAAGAAAGAAATTATTACAAAAGAGAGTGATGATAATAAATTTGTTGTTTCATATGTAGATACTCTGTTGGATTTAGAGCTTTCTGATGAGAAGATAAAGCTTGAAAACAGAGAGATAGTGAGTCTCTGCTCTGAGTTTCTTGACGCGGGAACTGATACTACTTCTACTGCCTTGCAATGGATAATGGCGAATTTAGTGAAATACCCAGAAATCCAAAGCAGGGTAGTTGAGGAAATTAAAGAGGTTTTAGGAGAGGAAGTGGAGGAGGTTGAAGAGGAGGATTTAGGAAAATTGCCTTATCTAAAAGCTGTGATTCTGGAAGGATTGAGAAGACATCCACCTGGGCATTTTGTGTTACCACATGCCGTGACAGAGGATACTGTGTTGGATGGTTACTTGATACCCAAGAAAGCGTCAGTAAATTTCATGGTGGCCGAGATTGGATGGGACCCAAAAGTGTGGGAAGATCCTATGGCTTTCAAACCAGAGAGGTTTCTGAATAATGGAGGTGAATCGTTTGATGTCACAGGAAATAAAGAGATAAAGATGATGCCTTTCGGAGCCGGTAGGAGGATATGTCCTGGCTACACGTTGGCTATTCTTCATTTGGAGTATTTTGTTGGTAATTTGGTTTGGAAGTTTGAATGGAAAAGTGTTGATGGAGGAGATGAGGTAGATTTGTCGGAGATGCAAGAGTTTACCGTCGGAATGAAGAATCCATTGCAGGCTCATGTAATGCCGAGGATGAAGAATTAG | 1518 | 45.19 | MELTWFLIAIFTPLFILKLFSSSSTTKLPPGPTSIPIISDLLWIRKSFSDLEPILRNFHAKYGPVVTLRIGPLPAVFIADRSLAHKALVQNGAVFADRPPAFAIDEIVSSSQHTINTAFYGPRWRLLRRNLTAEILHPFRIKSYSHARKWVLEILINRLRDQSRHHVRVIDHFHYAMFCLLVFMCFGDKVEETQVREIEKVQREYLVNFNRFNVLNFFPSLTKIFLRKRWKEFLTLQKNKRDVFIPFIEARRKAKKEIITKESDDNKFVVSYVDTLLDLELSDEKIKLENREIVSLCSEFLDAGTDTTSTALQWIMANLVKYPEIQSRVVEEIKEVLGEEVEEVEEEDLGKLPYLKAVILEGLRRHPPGHFVLPHAVTEDTVLDGYLIPKKASVNFMVAEIGWDPKVWEDPMAFKPERFLNNGGESFDVTGNKEIKMMPFGAGRRICPGYTLAILHLEYFVGNLVWKFEWKSVDGGDEVDLSEMQEFTVGMKNPLQAHVMPRMKN | 505 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 54682059 | 54683960 | - | Conep01aG0097100.1 | Cone1ag0928 | 431619 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone1ag0928 | 505 | CDD | CYP77_89 | 61 | 496 | - | - | |
| Cone1ag0928 | 505 | Gene3D | Cytochrome P450 | 22 | 505 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0928 | 505 | PRINTS | E-class P450 group I signature | 312 | 338 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0928 | 505 | PRINTS | E-class P450 group I signature | 292 | 309 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0928 | 505 | PRINTS | E-class P450 group I signature | 437 | 447 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0928 | 505 | PRINTS | E-class P450 group I signature | 447 | 470 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0928 | 505 | PRINTS | E-class P450 group I signature | 59 | 78 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0928 | 505 | PRINTS | E-class P450 group I signature | 356 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0928 | 505 | PRINTS | E-class P450 group I signature | 83 | 104 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0928 | 505 | PRINTS | E-class P450 group I signature | 397 | 421 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0928 | 505 | Pfam | Cytochrome P450 | 29 | 489 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0928 | 505 | SUPERFAMILY | Cytochrome P450 | 29 | 502 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0928 | 505 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 440 | 449 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone1ag0928 | 505 | PRINTS | P450 superfamily signature | 447 | 458 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0928 | 505 | PRINTS | P450 superfamily signature | 438 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0928 | 505 | PRINTS | P450 superfamily signature | 357 | 368 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0928 | 505 | PRINTS | P450 superfamily signature | 303 | 320 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0928 | 505 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 16 | 500 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Cone1ag0928 | 505 | FunFam | Cytochrome P450 family protein | 22 | 504 | - | - | |
| Cone1ag0928 | 505 | Coils | Coil | 327 | 347 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone16ag0620 | Cone-Chr16:7881075 | Cone1ag0928 | Cone-Chr1:54682059 | 1.10E-153 | dispersed | |
| Cone1ag0926 | Cone-Chr1:54677346 | Cone1ag0928 | Cone-Chr1:54682059 | 3.40E-134 | dispersed | |
| Cone1ag0928 | Cone-Chr1:54682059 | Cone2ag0385 | Cone-Chr2:2030918 | 1.11E-157 | dispersed | |
| Cone1ag0927 | Cone-Chr1:54679768 | Cone1ag0928 | Cone-Chr1:54682059 | 2.78E-239 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone1ag0928 | K24184 | - | rcu:8283072 | 672.544 |