Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0928 ATGGAGCTCACCTGGTTTCTTATCGCCATCTTCACTCCTCTGTTCATCCTCAAGCTTTTCTCCTCCTCCTCCACCACAAAACTCCCACCAGGCCCTACTTCTATCCCCATCATCAGTGACCTGTTATGGATTCGCAAATCCTTCTCGGATCTTGAGCCCATCCTCCGCAACTTCCATGCCAAGTATGGCCCGGTCGTCACCCTCCGCATCGGCCCACTCCCTGCAGTCTTCATAGCCGACCGCTCTCTCGCCCATAAGGCCCTGGTTCAAAACGGTGCTGTTTTCGCTGATCGTCCTCCGGCTTTCGCTATAGATGAGATAGTCAGTAGCAGCCAGCACACCATAAACACAGCCTTCTACGGCCCCAGATGGCGGCTCCTCCGCCGTAACCTCACGGCGGAGATCCTCCATCCTTTTCGAATCAAATCCTACTCTCACGCACGAAAATGGGTCCTTGAGATTCTCATAAATCGCCTGCGAGATCAATCTCGCCACCATGTTCGAGTCATCGATCATTTCCATTACGCCATGTTTTGCTTGCTCGTCTTCATGTGTTTTGGTGATAAGGTCGAGGAAACTCAAGTCAGAGAAATCGAGAAAGTTCAGCGTGAGTATCTAGTGAACTTCAATCGTTTCAATGTGTTAAATTTCTTCCCAAGCCTGACCAAGATATTTCTAAGAAAGCGTTGGAAGGAGTTCTTAACCTTGCAGAAGAACAAACGGGACGTCTTTATTCCTTTCATTGAAGCGAGAAGGAAAGCCAAGAAAGAAATTATTACAAAAGAGAGTGATGATAATAAATTTGTTGTTTCATATGTAGATACTCTGTTGGATTTAGAGCTTTCTGATGAGAAGATAAAGCTTGAAAACAGAGAGATAGTGAGTCTCTGCTCTGAGTTTCTTGACGCGGGAACTGATACTACTTCTACTGCCTTGCAATGGATAATGGCGAATTTAGTGAAATACCCAGAAATCCAAAGCAGGGTAGTTGAGGAAATTAAAGAGGTTTTAGGAGAGGAAGTGGAGGAGGTTGAAGAGGAGGATTTAGGAAAATTGCCTTATCTAAAAGCTGTGATTCTGGAAGGATTGAGAAGACATCCACCTGGGCATTTTGTGTTACCACATGCCGTGACAGAGGATACTGTGTTGGATGGTTACTTGATACCCAAGAAAGCGTCAGTAAATTTCATGGTGGCCGAGATTGGATGGGACCCAAAAGTGTGGGAAGATCCTATGGCTTTCAAACCAGAGAGGTTTCTGAATAATGGAGGTGAATCGTTTGATGTCACAGGAAATAAAGAGATAAAGATGATGCCTTTCGGAGCCGGTAGGAGGATATGTCCTGGCTACACGTTGGCTATTCTTCATTTGGAGTATTTTGTTGGTAATTTGGTTTGGAAGTTTGAATGGAAAAGTGTTGATGGAGGAGATGAGGTAGATTTGTCGGAGATGCAAGAGTTTACCGTCGGAATGAAGAATCCATTGCAGGCTCATGTAATGCCGAGGATGAAGAATTAG 1518 45.19 MELTWFLIAIFTPLFILKLFSSSSTTKLPPGPTSIPIISDLLWIRKSFSDLEPILRNFHAKYGPVVTLRIGPLPAVFIADRSLAHKALVQNGAVFADRPPAFAIDEIVSSSQHTINTAFYGPRWRLLRRNLTAEILHPFRIKSYSHARKWVLEILINRLRDQSRHHVRVIDHFHYAMFCLLVFMCFGDKVEETQVREIEKVQREYLVNFNRFNVLNFFPSLTKIFLRKRWKEFLTLQKNKRDVFIPFIEARRKAKKEIITKESDDNKFVVSYVDTLLDLELSDEKIKLENREIVSLCSEFLDAGTDTTSTALQWIMANLVKYPEIQSRVVEEIKEVLGEEVEEVEEEDLGKLPYLKAVILEGLRRHPPGHFVLPHAVTEDTVLDGYLIPKKASVNFMVAEIGWDPKVWEDPMAFKPERFLNNGGESFDVTGNKEIKMMPFGAGRRICPGYTLAILHLEYFVGNLVWKFEWKSVDGGDEVDLSEMQEFTVGMKNPLQAHVMPRMKN 505
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 54682059 54683960 - Conep01aG0097100.1 Cone1ag0928 431619
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0928 505 CDD CYP77_89 61 496 - -
Cone1ag0928 505 Gene3D Cytochrome P450 22 505 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag0928 505 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag0928 505 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag0928 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag0928 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag0928 505 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag0928 505 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag0928 505 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag0928 505 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag0928 505 Pfam Cytochrome P450 29 489 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag0928 505 SUPERFAMILY Cytochrome P450 29 502 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag0928 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone1ag0928 505 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag0928 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag0928 505 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag0928 505 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag0928 505 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 16 500 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Cone1ag0928 505 FunFam Cytochrome P450 family protein 22 504 - -
Cone1ag0928 505 Coils Coil 327 347 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0620 Cone-Chr16:7881075 Cone1ag0928 Cone-Chr1:54682059 1.10E-153 dispersed
Cone1ag0926 Cone-Chr1:54677346 Cone1ag0928 Cone-Chr1:54682059 3.40E-134 dispersed
Cone1ag0928 Cone-Chr1:54682059 Cone2ag0385 Cone-Chr2:2030918 1.11E-157 dispersed
Cone1ag0927 Cone-Chr1:54679768 Cone1ag0928 Cone-Chr1:54682059 2.78E-239 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0928 K24184 - rcu:8283072 672.544