Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0956 ATGGCTATAGAAGTACTCCATGCCCTGGACAATGCTAGGACACAATGGTACCACGTAACGGCTATTGTAATTGCCGGAATGGGCTTCTTCACAGATGCATATGATCTTTTCTGCATATCAACAGTTTCAAAACTCTTGGGCCGCCTTTACTACTTCGACCCATCTAGTTCAAAACCCGGAAAGCTACCCAACCAAGTTAACAATGCCGTTACGGGTGTTGCCTTAATTGGAACCCTAATGGGCCAGCTAGTATTTGGCTGGCTCGGGGACAAACTGGGCCGGAAAAGAATTTATGGAATCACTCTAGTTCTCATGGTCATCTGTGCCATTTGCTCGGGCTTATCTTTCGGCCATAGTGCAAAAGCCGTAATTATGACACTTTGCTTCTTCAGGTTCTGGCTCGGGTTTGGAATCGGAGGAGACTATCCTCTCTCCGCCACAATTATGTCCGAATACGCTAACAAAAAGACACGTGGAGCATTTATAGCTGCAGTTTTTGCAATGCAAGGTGTTGGGATTGTATTTGCCGGTTTGGTCACCATGATTTTGTCTAAACTCTTCTTGAGTTATTACCCCGCCCCAGCATACAACAAAGATCGAGTCTTTTCCACACAGCCTCAGGGAGATTACCTATGGCGTATAGTCTTCATGCTTGGAGCTTTGCCTGCACTTCTGACATTCTATTGGAGAATGAAAATGCCCGAAACAGGTCGATACACAGCTTTGATCGAAGGTAATGCGAAACAAGCAGCATCAGATATGGCGAGAGTGCTTGAAATCGACATTCAAGCCGACCAAGACAAATTAGCCCAATTCAAAGCTGCAAATGACTACTCAATGGTCTCTAATGAATTCTTTCAACGCCACGGACTCCATCTGGTCGGCACGACCACTACTTGGTTTTTGCTAGACATAGCATTTTACAGTCAGAATCTAACCCAGAAGGACATATTCCCCGCCATGAATCTGACACGAAAACCTGAGGTAATAAATGCTCTGGAGGAGATTTTCGAGACCTCAAAGGCCATGTTCCTAGTGGCTTTATTAGGAACTTTCCCCGGGTACTGGTTCACCGTCTTCTTGATAGAAAAGATCGGACGTTTCAAAATCCAACTTATGGGATTCTTCATGATGTCAGTTTTCATGGCAATCCTAGGGATCAAATATGATTACTTGAAATTGCATCCACTCCAGTTTGCAGTAATATACGGTCTAACGTTTTTCTTTGCAAATTTCGGACCAAACAGCACAACCTTTGTGCTGCCGGCCGAGCTTTTCCCTACCAGAGTGAGGTCCACTTGTCATGCTCTGAGTGCAGCAGCAGGGAAAGCTGGGGCATTGGTGGGGGCATTTGGGGTACAGAGCTATACGTTGGATGGTAACCCCATGAAGATTAAAAGGGCCATGATTGTCTTGGCGTTTACCAACATGCTCGGGTTTGTCTTCACATTCTTAGTCACAGAGACCAAAGGACGGTCTTTGGAGGAGATTTCGGGTGAAGATGGTGGTGATCAAAAGGAAGCTCAGATGACGGCAAGATCGGCATCTGCTCGGCAAACAGGCTACAGGGAAGATATGTGA 1581 45.79 MAIEVLHALDNARTQWYHVTAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPSSSKPGKLPNQVNNAVTGVALIGTLMGQLVFGWLGDKLGRKRIYGITLVLMVICAICSGLSFGHSAKAVIMTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGVGIVFAGLVTMILSKLFLSYYPAPAYNKDRVFSTQPQGDYLWRIVFMLGALPALLTFYWRMKMPETGRYTALIEGNAKQAASDMARVLEIDIQADQDKLAQFKAANDYSMVSNEFFQRHGLHLVGTTTTWFLLDIAFYSQNLTQKDIFPAMNLTRKPEVINALEEIFETSKAMFLVALLGTFPGYWFTVFLIEKIGRFKIQLMGFFMMSVFMAILGIKYDYLKLHPLQFAVIYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAAAGKAGALVGAFGVQSYTLDGNPMKIKRAMIVLAFTNMLGFVFTFLVTETKGRSLEEISGEDGGDQKEAQMTARSASARQTGYREDM 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 54796643 54798548 - Conep01aG0100100.1 Cone1ag0956 431647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0956 526 MobiDBLite consensus disorder prediction 496 526 - -
Cone1ag0956 526 Gene3D MFS general substrate transporter like domains 17 515 IPR036259 -
Cone1ag0956 526 CDD MFS_PhT 22 490 - -
Cone1ag0956 526 Pfam Sugar (and other) transporter 23 498 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone1ag0956 526 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 491 IPR020846 GO:0022857(InterPro)
Cone1ag0956 526 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 6 496 - -
Cone1ag0956 526 FunFam Inorganic phosphate transporter 1-6 17 512 - -
Cone1ag0956 526 NCBIfam phosphate:H+ symporter 7 500 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Cone1ag0956 526 SUPERFAMILY MFS general substrate transporter 9 498 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0956 Cone-Chr1:54796643 Cone7ag0321 Cone-Chr7:1397719 8.26E-236 dispersed
Cone5ag0655 Cone-Chr5:2796411 Cone1ag0956 Cone-Chr1:54796643 6.29E-25 transposed
Cone5ag0656 Cone-Chr5:2796804 Cone1ag0956 Cone-Chr1:54796643 1.06E-11 transposed
Cone1ag0956 Cone-Chr1:54796643 Cone5ag0654 Cone-Chr5:2795789 3.60E-60 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0956 K08176 - csv:101210631 884.789