Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag0971 | ATGGTTGAAACAAGAAGGCCGTTCCCAGAATCTTTGGTCATTGTTATTTTTACTCTTGTTCTCTGTCAGTTGGAAACCTGCATAAATGCTGAGAACAATAAAAAACATCACTGTCCCCCATCTTCATGCGGTGATATCCATAACATAAGCTACCCATTCCGACTTAAAGACGATCCAAAACACTGTGGCAACAAAAGATTGTCCGAGCCTCTAACTTTTCTGAGTTGTGCAAACCCAATAAAATCCTCCTCTCTGTACATGAGTCCCCCTACTTGTAAGAATGCTACTAATTCTGAAGGATATTCTTATATAACTGTTGGGAGAATGAACGCCTCGGAGATGAAGGTGTCGTGCCACATAAGTATGTTGGCCATCACATCATGGCCAGTTAAGGATGATGAAAAGAATATTTCATACAAAGATGCCCGGAAAATGCTCATCTATGGGTTTGAGCTTTCATGGGCCTATTCTTGCCGTGTTGACGATCGATATTGTGAACGTATATGCAGCTCTTTACCGGAATACCCCGTCAAATTTTGTGGCAGAAGTACTCTGGGCTTGATTCAATCCTATGCGGTTGAGTTTATTATATCTGTCCTAATTTATTTGGTAGTATTCTGGACAGCAACGAAATGCGTCCTTGGTACTCCATTTGTGATTGCATTTTTGATCTACAAATGGCGAAGACGGCATTTATCAATGTACAACAACATTGAAGATTATCTACAAAGTCAAAATAATCTCAACCCAATTAGGTACTCCTTTTCAGACATTAAGAAGATGACTCAACGTTTCAAGCACAAGTTAGGAGAAGGCGGCTTTGGCTCTGTGTACAGAGGAAAACTTAAGAGTGGAAGTTTCGTAGCAATCAAGGTATTATCGAGCAAATCAAAAGCCAACGGCCAAGACTTTATCAATGAAATTGCAACCATTGGCAGGATCCACCATGTTAATGTGGTTCAACTTATCGGTTTCTGTGTAGAAGGATCAAAGCGTGCTCTGGTTTACGACTTTATGCCAAATGGGTCTCTTGATAAGTACATATTTTCCCTTGAGGAAAGTAACCCATTAAGCATCGAAAAGATGTTTGAAATTTCTCTTGGAATCGCAAGTGGGATCGAGTATCTGCATAGAGGGTGTGAGAAACAAATTCTACATTTTGACATCAAGCCTCACAACATCCTTCTTGATGGGAACTTTATTCCAAAGGTTTCCGATTTCGGGCTAGCCCGACTGTATTCAGCTGATGAAAGCATTGTGATTTTAACTGCCGCGAGAGGAACACTAGGTTACATGGCTCCTGAGCTATGCTACAAAAACCTTGGAGGGGTTTCTCATAAAGCTGATGTCTACAGCTTTGGGATGTTATTGATGGAAATGGCAGGAAAAAGAAAGAATGTTAATAACTTCGCGGAGCACTCGAGCCAAGTATTCTTCCCTTTATGGGCTTATGACCAATTCAACCAAGGAAAAGACATTGAGATTGAAGATGCCACAGAAGAGGAGATCGGATTAACAAAGAAGATGATGATAGTGGCACTCTGGTGTATGCAAATGAGGCCTAGTAATCGTCCTGCCATGAAAAGAGTCGTAGATATGCTCGAGGGTGAACTTGAAAGCTTACAGATGCCTCCCTACAAGCCTTTGGAATTTCCAGAAGAGATGCAGTCGGTAAAGGATGTCGGAAATAACACTGCTCCGTCTTGTTCATCAATTCCGTCAGACGATTGGTCCTCTGAATCTGTCAGTTTGTTTTTGAATTCCAACTAA | 1770 | 41.19 | MVETRRPFPESLVIVIFTLVLCQLETCINAENNKKHHCPPSSCGDIHNISYPFRLKDDPKHCGNKRLSEPLTFLSCANPIKSSSLYMSPPTCKNATNSEGYSYITVGRMNASEMKVSCHISMLAITSWPVKDDEKNISYKDARKMLIYGFELSWAYSCRVDDRYCERICSSLPEYPVKFCGRSTLGLIQSYAVEFIISVLIYLVVFWTATKCVLGTPFVIAFLIYKWRRRHLSMYNNIEDYLQSQNNLNPIRYSFSDIKKMTQRFKHKLGEGGFGSVYRGKLKSGSFVAIKVLSSKSKANGQDFINEIATIGRIHHVNVVQLIGFCVEGSKRALVYDFMPNGSLDKYIFSLEESNPLSIEKMFEISLGIASGIEYLHRGCEKQILHFDIKPHNILLDGNFIPKVSDFGLARLYSADESIVILTAARGTLGYMAPELCYKNLGGVSHKADVYSFGMLLMEMAGKRKNVNNFAEHSSQVFFPLWAYDQFNQGKDIEIEDATEEEIGLTKKMMIVALWCMQMRPSNRPAMKRVVDMLEGELESLQMPPYKPLEFPEEMQSVKDVGNNTAPSCSSIPSDDWSSESVSLFLNSN | 589 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 54870379 | 54873011 | - | Conep01aG0101600.1 | Cone1ag0971 | 431662 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag0971 | 589 | MobiDBLite | consensus disorder prediction | 558 | 589 | - | - | |
Cone1ag0971 | 589 | SUPERFAMILY | Protein kinase-like (PK-like) | 240 | 535 | IPR011009 | - | |
Cone1ag0971 | 589 | ProSitePatterns | Protein kinases ATP-binding region signature. | 269 | 291 | IPR017441 | GO:0005524(InterPro) | |
Cone1ag0971 | 589 | Pfam | Protein kinase domain | 266 | 532 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag0971 | 589 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 153 | 556 | IPR045874 | GO:0004672(InterPro) | |
Cone1ag0971 | 589 | Gene3D | Phosphorylase Kinase; domain 1 | 236 | 338 | - | - | |
Cone1ag0971 | 589 | FunFam | PR5-like receptor kinase | 339 | 546 | - | - | |
Cone1ag0971 | 589 | MobiDBLite | consensus disorder prediction | 556 | 589 | - | - | |
Cone1ag0971 | 589 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 384 | 396 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag0971 | 589 | FunFam | serine/threonine-protein kinase PBS1-like | 233 | 338 | - | - | |
Cone1ag0971 | 589 | Gene3D | Transferase(Phosphotransferase) domain 1 | 339 | 550 | - | - | |
Cone1ag0971 | 589 | SMART | serkin_6 | 263 | 546 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag0971 | 589 | ProSiteProfiles | Protein kinase domain profile. | 263 | 538 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag0971 | Cone-Chr1:54870379 | Cone5ag0663 | Cone-Chr5:2834063 | 1.24E-283 | dispersed | |
Cone5ag0496 | Cone-Chr5:2085612 | Cone1ag0971 | Cone-Chr1:54870379 | 7.84E-08 | dispersed | |
Cone1ag0971 | Cone-Chr1:54870379 | Cone1ag0972 | Cone-Chr1:54878381 | 3.95E-101 | tandem | |
Cone1ag0971 | Cone-Chr1:54870379 | Cone5ag0674 | Cone-Chr5:2883247 | 1.79E-29 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82490 | PF10280 | Med11 | 1.10E-13 | No_clan | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag0971 | - | - | - | 0.0 |