Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0971 ATGGTTGAAACAAGAAGGCCGTTCCCAGAATCTTTGGTCATTGTTATTTTTACTCTTGTTCTCTGTCAGTTGGAAACCTGCATAAATGCTGAGAACAATAAAAAACATCACTGTCCCCCATCTTCATGCGGTGATATCCATAACATAAGCTACCCATTCCGACTTAAAGACGATCCAAAACACTGTGGCAACAAAAGATTGTCCGAGCCTCTAACTTTTCTGAGTTGTGCAAACCCAATAAAATCCTCCTCTCTGTACATGAGTCCCCCTACTTGTAAGAATGCTACTAATTCTGAAGGATATTCTTATATAACTGTTGGGAGAATGAACGCCTCGGAGATGAAGGTGTCGTGCCACATAAGTATGTTGGCCATCACATCATGGCCAGTTAAGGATGATGAAAAGAATATTTCATACAAAGATGCCCGGAAAATGCTCATCTATGGGTTTGAGCTTTCATGGGCCTATTCTTGCCGTGTTGACGATCGATATTGTGAACGTATATGCAGCTCTTTACCGGAATACCCCGTCAAATTTTGTGGCAGAAGTACTCTGGGCTTGATTCAATCCTATGCGGTTGAGTTTATTATATCTGTCCTAATTTATTTGGTAGTATTCTGGACAGCAACGAAATGCGTCCTTGGTACTCCATTTGTGATTGCATTTTTGATCTACAAATGGCGAAGACGGCATTTATCAATGTACAACAACATTGAAGATTATCTACAAAGTCAAAATAATCTCAACCCAATTAGGTACTCCTTTTCAGACATTAAGAAGATGACTCAACGTTTCAAGCACAAGTTAGGAGAAGGCGGCTTTGGCTCTGTGTACAGAGGAAAACTTAAGAGTGGAAGTTTCGTAGCAATCAAGGTATTATCGAGCAAATCAAAAGCCAACGGCCAAGACTTTATCAATGAAATTGCAACCATTGGCAGGATCCACCATGTTAATGTGGTTCAACTTATCGGTTTCTGTGTAGAAGGATCAAAGCGTGCTCTGGTTTACGACTTTATGCCAAATGGGTCTCTTGATAAGTACATATTTTCCCTTGAGGAAAGTAACCCATTAAGCATCGAAAAGATGTTTGAAATTTCTCTTGGAATCGCAAGTGGGATCGAGTATCTGCATAGAGGGTGTGAGAAACAAATTCTACATTTTGACATCAAGCCTCACAACATCCTTCTTGATGGGAACTTTATTCCAAAGGTTTCCGATTTCGGGCTAGCCCGACTGTATTCAGCTGATGAAAGCATTGTGATTTTAACTGCCGCGAGAGGAACACTAGGTTACATGGCTCCTGAGCTATGCTACAAAAACCTTGGAGGGGTTTCTCATAAAGCTGATGTCTACAGCTTTGGGATGTTATTGATGGAAATGGCAGGAAAAAGAAAGAATGTTAATAACTTCGCGGAGCACTCGAGCCAAGTATTCTTCCCTTTATGGGCTTATGACCAATTCAACCAAGGAAAAGACATTGAGATTGAAGATGCCACAGAAGAGGAGATCGGATTAACAAAGAAGATGATGATAGTGGCACTCTGGTGTATGCAAATGAGGCCTAGTAATCGTCCTGCCATGAAAAGAGTCGTAGATATGCTCGAGGGTGAACTTGAAAGCTTACAGATGCCTCCCTACAAGCCTTTGGAATTTCCAGAAGAGATGCAGTCGGTAAAGGATGTCGGAAATAACACTGCTCCGTCTTGTTCATCAATTCCGTCAGACGATTGGTCCTCTGAATCTGTCAGTTTGTTTTTGAATTCCAACTAA 1770 41.19 MVETRRPFPESLVIVIFTLVLCQLETCINAENNKKHHCPPSSCGDIHNISYPFRLKDDPKHCGNKRLSEPLTFLSCANPIKSSSLYMSPPTCKNATNSEGYSYITVGRMNASEMKVSCHISMLAITSWPVKDDEKNISYKDARKMLIYGFELSWAYSCRVDDRYCERICSSLPEYPVKFCGRSTLGLIQSYAVEFIISVLIYLVVFWTATKCVLGTPFVIAFLIYKWRRRHLSMYNNIEDYLQSQNNLNPIRYSFSDIKKMTQRFKHKLGEGGFGSVYRGKLKSGSFVAIKVLSSKSKANGQDFINEIATIGRIHHVNVVQLIGFCVEGSKRALVYDFMPNGSLDKYIFSLEESNPLSIEKMFEISLGIASGIEYLHRGCEKQILHFDIKPHNILLDGNFIPKVSDFGLARLYSADESIVILTAARGTLGYMAPELCYKNLGGVSHKADVYSFGMLLMEMAGKRKNVNNFAEHSSQVFFPLWAYDQFNQGKDIEIEDATEEEIGLTKKMMIVALWCMQMRPSNRPAMKRVVDMLEGELESLQMPPYKPLEFPEEMQSVKDVGNNTAPSCSSIPSDDWSSESVSLFLNSN 589
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 54870379 54873011 - Conep01aG0101600.1 Cone1ag0971 431662
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0971 589 MobiDBLite consensus disorder prediction 558 589 - -
Cone1ag0971 589 SUPERFAMILY Protein kinase-like (PK-like) 240 535 IPR011009 -
Cone1ag0971 589 ProSitePatterns Protein kinases ATP-binding region signature. 269 291 IPR017441 GO:0005524(InterPro)
Cone1ag0971 589 Pfam Protein kinase domain 266 532 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag0971 589 PANTHER RUST RESISTANCE KINASE LR10-RELATED 153 556 IPR045874 GO:0004672(InterPro)
Cone1ag0971 589 Gene3D Phosphorylase Kinase; domain 1 236 338 - -
Cone1ag0971 589 FunFam PR5-like receptor kinase 339 546 - -
Cone1ag0971 589 MobiDBLite consensus disorder prediction 556 589 - -
Cone1ag0971 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 384 396 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag0971 589 FunFam serine/threonine-protein kinase PBS1-like 233 338 - -
Cone1ag0971 589 Gene3D Transferase(Phosphotransferase) domain 1 339 550 - -
Cone1ag0971 589 SMART serkin_6 263 546 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag0971 589 ProSiteProfiles Protein kinase domain profile. 263 538 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0971 Cone-Chr1:54870379 Cone5ag0663 Cone-Chr5:2834063 1.24E-283 dispersed
Cone5ag0496 Cone-Chr5:2085612 Cone1ag0971 Cone-Chr1:54870379 7.84E-08 dispersed
Cone1ag0971 Cone-Chr1:54870379 Cone1ag0972 Cone-Chr1:54878381 3.95E-101 tandem
Cone1ag0971 Cone-Chr1:54870379 Cone5ag0674 Cone-Chr5:2883247 1.79E-29 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82490 PF10280 Med11 1.10E-13 No_clan Cone PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0971 - - - 0.0