Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag1025 | ATGGCTTCAACAGGAGAAACCCAGATGACTCCAACTCAGGTATCGGATGAAGAAGCAAACCTCTTCGCCATGCAACTGGCCAGCGCTTCTGTTCTTCCTATGGTCCTCAAATCCGCCATAGAGCTTGACCTTCTAGAAATCATAGCACAAGCTGGGCCAGGAGCTTTCCTATCACCTTCTGATATTGCCTCTAAGCTTCCCACCACTAACCCTGATGCAGCTGTGGTGCTTGATCGCATGCTGCGCCTCCTTGCCACTTACTCTGTTCTCACCTACTCTCTACGCACTCTGCCTGATGGCAGAGTTGAGCGGCTTTATGGCTTGGCCCCTGTTTGCAAGTTCTTGACCAAGAACGAAGTTGGTGTTTCTATTGCCGCTCTTTGTCTCATGAATCAGGATAAAGTCCTCATGGAAAGCTGGTACCACTTGAAAGATGCTGTTCTAGAAGGTGGGATTCCATTCAACAAGGCATATGGAATGACAGCATTTGACTATCACGGAACCGATCCAAGATTCAACAAGGTTTTCAACAAGGGAATGGCCGATCACTCAACCATCACCATGAAGAAACTCCTCGAGACCTACAAAGGCTTCGAAGGCCTCAAATCAGTCGTGGATGTCGGAGGTGGGACTGGATCTGTCGTTAGCATGATTGTTTCTAAGTACCCCTCCTTAAAGGGCATCAACTTTGATCTACCTCATGTGATCAAGGATGCTCCGTCTTACCCTGGTGTTGAGCATGTTGGAGGAGATATGTTTGTTAGCATTCCTAAAGGAGATGCCATTTTCATGAAGTGGATCTGTCACGATTGGAGTGATGAGCACTGCTTGAAATTCTTGAAGAACTGCTACGGAGCGCTTCCACATAATGGAAAAGTGATAATAGCGGAGTGTATTCTTCCAGTAGCTCCAGACACGAGCCTGGCAACTAAGGGAGTGGTTCATATCGACATCATCATGTTGGCTCATAATCCAGGAGGCAAAGAGAGGACCCAGAAAGAATTTGAAGGTTTGGCAAAGGGGGCTGGATTTCAGGGCTTCAAAGTGGAGTGTTCTGCTTTCAATACTTATGTCATGGAATTTCTTAAGCGGGTTTGA | 1098 | 46.99 | MASTGETQMTPTQVSDEEANLFAMQLASASVLPMVLKSAIELDLLEIIAQAGPGAFLSPSDIASKLPTTNPDAAVVLDRMLRLLATYSVLTYSLRTLPDGRVERLYGLAPVCKFLTKNEVGVSIAALCLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKLLETYKGFEGLKSVVDVGGGTGSVVSMIVSKYPSLKGINFDLPHVIKDAPSYPGVEHVGGDMFVSIPKGDAIFMKWICHDWSDEHCLKFLKNCYGALPHNGKVIIAECILPVAPDTSLATKGVVHIDIIMLAHNPGGKERTQKEFEGLAKGAGFQGFKVECSAFNTYVMEFLKRV | 365 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 55137199 | 55139137 | - | Conep01aG0107300.1 | Cone1ag1025 | 431716 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag1025 | 365 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 123 | 361 | IPR029063 | - | |
Cone1ag1025 | 365 | Gene3D | Vaccinia Virus protein VP39 | 116 | 363 | IPR029063 | - | |
Cone1ag1025 | 365 | Gene3D | - | 1 | 115 | IPR036388 | - | |
Cone1ag1025 | 365 | PIRSF | O-mtase | 1 | 363 | IPR016461 | GO:0008168(InterPro) | |
Cone1ag1025 | 365 | SUPERFAMILY | Winged helix DNA-binding domain | 15 | 119 | IPR036390 | - | |
Cone1ag1025 | 365 | Pfam | Dimerisation domain | 34 | 85 | IPR012967 | GO:0046983(InterPro) | |
Cone1ag1025 | 365 | PANTHER | O-METHYLTRANSFERASE | 18 | 349 | IPR016461 | GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER) | |
Cone1ag1025 | 365 | CDD | AdoMet_MTases | 204 | 295 | - | - | |
Cone1ag1025 | 365 | FunFam | Caffeic acid 3-O-methyltransferase | 3 | 115 | - | - | |
Cone1ag1025 | 365 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 24 | 363 | IPR016461 | GO:0008168(InterPro) | |
Cone1ag1025 | 365 | FunFam | Caffeic acid O-methyltransferase | 116 | 363 | - | - | |
Cone1ag1025 | 365 | Pfam | O-methyltransferase domain | 140 | 345 | IPR001077 | GO:0008171(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone19ag1221 | Cone-Chr19:8477657 | Cone1ag1025 | Cone-Chr1:55137199 | 7.59E-74 | dispersed | |
Cone1ag1025 | Cone-Chr1:55137199 | Cone6ag0022 | Cone-Chr6:150563 | 6.06E-146 | dispersed | |
Cone1ag1025 | Cone-Chr1:55137199 | Cone14ag0470 | Cone-Chr14:2258367 | 6.89E-74 | wgd | |
Cone1ag1025 | Cone-Chr1:55137199 | Cone5ag0732 | Cone-Chr5:3154646 | 3.31E-258 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag1025 | K13066 | - | mdm:103426529 | 647.121 |