Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1064 ATGAAACGAACCCACATGCTTAAACTCATTCTTCTTACAACTTCGGTCACAATTCCGATATTTTTCATACTTATCATCATCTTCTTCTTTTACCGCAAGAGATTGCCAGAAACAGAGCAGGCAGACTTAGAAAAAGCAGAGCAGAAACAGAGAGAAGAATCAAGAACAGACGATTTGGTCACTTTTCCAGGTGGTCAAGACTTGACCATTTTTGACATATTGGATGCTCCAGGTGAAGTGATTGGAAAATCAGACTATGGTACTTTGTACAAGGCCTTTTTGCAGAGGAATAGTACTTTGAGGCTGCTTAGATTCTTAAGGCCTGTCTGTACTTCAAAAGACGAAGATTTTGAGGATTTGATACGGTTGATTGGGTGTGTTAGACATCCTAATTTGGTTCCTTTGTTGGGTTTTTATGCTGGATCAAGAGGTGAGAAGCTTCTTGTTCATCCTTTCTATGGCCGTGGTAGTCTGTCTGAATTCATTAGAGATGGAGGAAACGACTCTAAAAGATGGGCCATCATACTCAAAATCTCAATAGGTATAGCAACAGGGTTAGACAATCTTCACACGGGCTATCATAAGCCCTTAATCCACGGAAATCTCAAGTCCAAGAATGTACTTTTGGACCGAAACTACCAACCCTGCGTCTCAGATTTCAGCCTGCATCTTCTTCTAAATCCAACAGCGGGTCAGGAAATGCTAGAAGCTTCCGCAATGGATGGTTACAAAGCACCCGAGCTTATCAAAATGAGAGATGTAAGTGAAGAGAGTGATGTTTATAGCTATGGAGTGATCTTATTGGAATTACTTTCGGGGAAAGAGGCGGTTAATGAGAATCCGACTTCTGATGAGGATTTTTACTTGCCTAACTTTATGAGGAATGCGGTTTTAGGACATAGGATCACGGACTTGTTTCATCCGGATATACTTCTTATGAGCAATAGATGTAGTAGTAATAGTAGTGAGGAGGGGTTGCTTAGCGAAGAGACGATTCTGAAGTTGTTCCAGCTTGCTATGGCTTGTTGCTCTCCCTCTCCTTCTCTTAGACCCAGCTTTAAGCAAGTAACATGGAAGCTTGAAGAAATCGGAAAATGA 1098 41.35 MKRTHMLKLILLTTSVTIPIFFILIIIFFFYRKRLPETEQADLEKAEQKQREESRTDDLVTFPGGQDLTIFDILDAPGEVIGKSDYGTLYKAFLQRNSTLRLLRFLRPVCTSKDEDFEDLIRLIGCVRHPNLVPLLGFYAGSRGEKLLVHPFYGRGSLSEFIRDGGNDSKRWAIILKISIGIATGLDNLHTGYHKPLIHGNLKSKNVLLDRNYQPCVSDFSLHLLLNPTAGQEMLEASAMDGYKAPELIKMRDVSEESDVYSYGVILLELLSGKEAVNENPTSDEDFYLPNFMRNAVLGHRITDLFHPDILLMSNRCSSNSSEEGLLSEETILKLFQLAMACCSPSPSLRPSFKQVTWKLEEIGK 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55285078 55287336 - Conep01aG0111200.1 Cone1ag1064 431755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1064 365 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 17 364 IPR052451 -
Cone1ag1064 365 Gene3D Phosphorylase Kinase; domain 1 72 152 - -
Cone1ag1064 365 SUPERFAMILY Protein kinase-like (PK-like) 78 361 IPR011009 -
Cone1ag1064 365 ProSiteProfiles Protein kinase domain profile. 75 365 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag1064 365 Gene3D Transferase(Phosphotransferase) domain 1 154 365 - -
Cone1ag1064 365 Pfam Protein tyrosine and serine/threonine kinase 79 358 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1064 Cone-Chr1:55285078 Cone1ag1640 Cone-Chr1:57709724 4.06E-53 dispersed
Cone1ag1064 Cone-Chr1:55285078 Cone5ag0777 Cone-Chr5:3320127 2.54E-230 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82493 PF00069 Pkinase 2.10E-73 CL0016 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1064 - - - 0.0