Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1124 ATGGCACACAATATTGAACGAAGAATCAAATCAAATGCTACTATACACATTTTGCTTCTTTTAGCTATCGCCAGTTTCAATGGCGAAGCCGTCCTTGACAGTAGTTTTTACGAGAAAACATGTCTGGAAGCAGAGAAAATCATCCTGCAAACTGTTCATAATGCTTCCTTGCATGACCCTAAAGTCCCCGCTCGTATACTCCGGATGTTCTTCCACGACTGTTTCATCAGGGGATGTGATGCCTCAGTCCTATTAGACTCAACTCCAGGAAACCAGGCTGAGAAAGACGGCCCTCCAAATATTTCCCTCCGATCATTTTACGTCATAGATGCTGCCAAAACAAGGCTAGAAGATGCTTGCCCGAAAACCGTTTCTTGTGCTGATATAATAGCAATTGCTGCTCGAGATGTAGTAGTAACCATGTCTGGAGGTCCTTATTGGAACGTGCTAAAGGGAAGGAAAGATGGAAAAATATCTAAAGCTTCAGAAACCATAAACTTGCCAGCTCCAACCTTTAACACGTCACAACTCATCAAAAGCTTTGCAAGTAGAGGATTAGAAGTGAAAGACATGGTTGCACTATCAGGTGGTCACACTCTAGGCTTCTCACACTGCTCGTCCTTCGAAGGGCGTCTACGTAATTTCACTTCATCTCACGACATCGATCACAGTATGAATACTGAATTTGCTCAGAATCTGAGGAAGAAATGCACAATACCAAACAGGGATAGAAATGCTGGGGAGTTTTTGGACTCCACGTCAACAAGGTTTGATAATGTATATTACAAGGAAGTGATGGGAGGAAAGGGTGTGTTTGGTTCGGATCAAGCACTGTTCGGTGATTATAGGACTAGGTGGATTGTTGAAGCGTTTGCTAGAGATGAGAGCTTGTTCTTTAAGGAGTTTGCTGCTTCAATGGTTAAACTGGGGAATGTTGGGGTGAATAATGTTAAAGATGGTGAAGTAAGATTGAAATGTAGCATGGTGAACTAA 993 42.5 MAHNIERRIKSNATIHILLLLAIASFNGEAVLDSSFYEKTCLEAEKIILQTVHNASLHDPKVPARILRMFFHDCFIRGCDASVLLDSTPGNQAEKDGPPNISLRSFYVIDAAKTRLEDACPKTVSCADIIAIAARDVVVTMSGGPYWNVLKGRKDGKISKASETINLPAPTFNTSQLIKSFASRGLEVKDMVALSGGHTLGFSHCSSFEGRLRNFTSSHDIDHSMNTEFAQNLRKKCTIPNRDRNAGEFLDSTSTRFDNVYYKEVMGGKGVFGSDQALFGDYRTRWIVEAFARDESLFFKEFAASMVKLGNVGVNNVKDGEVRLKCSMVN 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55577059 55578237 - Conep01aG0117300.1 Cone1ag1124 431815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1124 330 FunFam Peroxidase 168 309 - -
Cone1ag1124 330 CDD secretory_peroxidase 32 329 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone1ag1124 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Cone1ag1124 330 Gene3D - 35 330 - -
Cone1ag1124 330 PANTHER PEROXIDASE 25-RELATED 33 326 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cone1ag1124 330 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1124 330 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1124 330 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1124 330 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1124 330 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1124 330 SUPERFAMILY Heme-dependent peroxidases 32 330 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1124 330 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1124 330 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1124 330 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1124 330 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1124 330 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1124 330 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1124 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1124 330 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1124 330 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1124 330 FunFam Peroxidase 35 176 - -
Cone1ag1124 330 ProSiteProfiles Plant heme peroxidase family profile. 31 330 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1124 330 Gene3D Peroxidase, domain 2 168 309 - -
Cone1ag1124 330 Pfam Peroxidase 50 294 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1124 Cone-Chr1:55577059 Cone6ag1208 Cone-Chr6:9431302 2.62E-91 dispersed
Cone17ag1423 Cone-Chr17:9747372 Cone1ag1124 Cone-Chr1:55577059 1.25E-111 transposed
Cone5ag0834 Cone-Chr5:3581568 Cone1ag1124 Cone-Chr1:55577059 6.74E-22 transposed
Cone1ag1124 Cone-Chr1:55577059 Cone5ag0833 Cone-Chr5:3581103 8.67E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1124 K00430 - mdm:103440034 455.677