Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1132 ATGCAAACTCTGCACTTTCTGGAGAATAATTCTCATTCCCATCACGAACAAAATGTCCAACACATCCAGCAGAGCCAGCAACATCCTCAGCAAGGTGGTGCTTCAAGTGCCACGTCATTACCCACATCTCAGACCGGTCAGATTTCCCTTCCTATGGGTGTGCGACTTCCTGGGTCTTTCGCTCCAGACTCAAATAATTTCTCTCAGGCGCTGAAGAAGCCACGGTTGGATATTAAGCAAGAAGATATCTTGCAACAGCAGGTATTGCAACAGCTGCTCCAAAGACAGGAGCCTATGCAGTTACAAAGCCGTAATCCACAGTTACAAGCTCTGATTCAGCAACAGAGAATACGACAGCAGCAGCAGATTTTACAGTCTATGCCACAGCTGCAGCGAGCTCATTTGCAGCAGCAGCAGCAACAGATGCAATTGAGGCAACAGTTGCAACAACAAGCAATGCAACAGCCAGTAACTTCCGTTAAGCGTCCCTATGATGGAGGTGTTTGTGCTCGTCGACTTATGCAATATTTGTACCATCAGATGCAAAGACCCGCTGATAACAGTATATCCTATTGGAGGAAATTTGTGGCGGAGTATTATTCTCCCCGTGCAAAGAAAAGATGGTGCTTGTCGATGTATGATAATGTTGGCCATCATGCACTGGGTGTGTTTCCCCAGGCAGCAATGGATGCATGGCAGTGTGACATTTGTGGGTCGAAGTCTGGAAGGGGATTTGAGGCTACTTTTGAAGTTCTCCCTAGACTCAATGAGATTAAATACGGAAGTGGAGTCATTGATGAGCTTCTGTTTTTGGACATGCCTCGTGAAGTTAGATTTCCCTCTGGAGTCATGACGTTGGAGTATGGAAAGGCAGTTCAAGAGAGTATTTATGAGCAACTTCGTATAGTCCGTGAGGGACAGCTTCGTATTATATTCACACCTGAATTAAAGATATTATCTTGGGAATTTTGTGCACGCCGTCATGAAGAACTTCTTCCCCGTAGGCTGGTTGCACCACAGGTGAATCAGTTGGTTCAGGTTGCACAGAAATGCCAGAGCACTATAGCTGAAGGTGGAACTGATGGCATTTCTCAGCAGGATTTAAAAACAAATAGCAATATGGTATTGATGGCTGGTCGTCAGCTTGCAAAGAGTCTGGAGTTACAGTCACTCAATGACTTGGGTTTCTCTAAAAGATATGTCAGGTGTCTGCAGATTTCAGAGGTTGTCAATAGCATGAGAGATCTTGTAGATTTCTGCCGGGAGCACAAAGTTGGGCCAATTGAGGGCTTGAAAAACTATCCTCGGCATGCCAGTGGAGCCAAGCTTCAAATGCAGAAACTACAAGAAATGGAGCAGATAGCAAGCGCTCAGGGTCTACCCACTGATCGAAACACTCTTAACAAGCTGATGGCAATGCATCCCGGACTTAACACACAGATCAATAGCAACCATCAAATAGGTGGCCGAGTAGGAGGAACTCTGAGCGGTTCGCCTCAAGCTGCTATGGCTTTATCCACCTACCAGAACATGCTTATGAGACAGAACTTAATGAGTTCAAACCCTAGCCCACATCAACAGGAAGCCTCTTCTTCCTTCAATAATAATCCCCCTAATCAGAGTCCTTCCTCAAGCTTCCAAGGAGGGAATGGGGCTTTATTACCTGGATCCATGCAGAACTCACCCGTTAGTGGCTTTTCAAGCCCCCATCATCTACCCCCACAACAGAATCAGCAACAACCACAGCAGCTTCAACAAAGGTCGTTGAGCTCTAATAGCTTACTCCAGCAGCAACAACAAAGCCATTCTCACTCTCAAACCGGCCTCGGAAATCAGGCCTTACAGCAGCAGCAGATGATGCAGCAAATAATGCCCATATCGAATAACAGTGGGGTAGGACAGCAGCAACCATCTCTTTTGGCTCCGAATCCAAATGGGAGTGTCAGACCAAGGAGTAACGGGCCTGCTCCAAGCCGGAGTAACAGCTTCAAAGCTGCATCAAACAGTGACTCATCTGCAGCTGGTGTTGGTATTGGTAATAATAATAATGGTGCGTTTAGCCGGAGGGGCGCAGCAGAGTTGACACAAAACCGTCATTTACAGGAAGGTATGGTTCAGGATATTGCCCATGAGTTCACAGATAACGGGTTTTTTAACAGCGATCTTGATGATTCTATGGATTATGGTTGGAAGGCTTGA 2199 46.29 MQTLHFLENNSHSHHEQNVQHIQQSQQHPQQGGASSATSLPTSQTGQISLPMGVRLPGSFAPDSNNFSQALKKPRLDIKQEDILQQQVLQQLLQRQEPMQLQSRNPQLQALIQQQRIRQQQQILQSMPQLQRAHLQQQQQQMQLRQQLQQQAMQQPVTSVKRPYDGGVCARRLMQYLYHQMQRPADNSISYWRKFVAEYYSPRAKKRWCLSMYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKYGSGVIDELLFLDMPREVRFPSGVMTLEYGKAVQESIYEQLRIVREGQLRIIFTPELKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAEGGTDGISQQDLKTNSNMVLMAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMRDLVDFCREHKVGPIEGLKNYPRHASGAKLQMQKLQEMEQIASAQGLPTDRNTLNKLMAMHPGLNTQINSNHQIGGRVGGTLSGSPQAAMALSTYQNMLMRQNLMSSNPSPHQQEASSSFNNNPPNQSPSSSFQGGNGALLPGSMQNSPVSGFSSPHHLPPQQNQQQPQQLQQRSLSSNSLLQQQQQSHSHSQTGLGNQALQQQQMMQQIMPISNNSGVGQQQPSLLAPNPNGSVRPRSNGPAPSRSNSFKAASNSDSSAAGVGIGNNNNGAFSRRGAAELTQNRHLQEGMVQDIAHEFTDNGFFNSDLDDSMDYGWKA 732
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55600990 55606414 - Conep01aG0118100.1 Cone1ag1132 431823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1132 732 MobiDBLite consensus disorder prediction 1 53 - -
Cone1ag1132 732 MobiDBLite consensus disorder prediction 627 680 - -
Cone1ag1132 732 MobiDBLite consensus disorder prediction 16 50 - -
Cone1ag1132 732 PANTHER LIM DOMAIN-BINDING PROTEIN 13 721 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
Cone1ag1132 732 MobiDBLite consensus disorder prediction 517 612 - -
Cone1ag1132 732 Pfam LIM-domain binding protein 172 432 IPR029005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1132 Cone-Chr1:55600990 Cone20ag0406 Cone-Chr20:1971557 1.23E-107 dispersed
Cone1ag1132 Cone-Chr1:55600990 Cone5ag0840 Cone-Chr5:3596482 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1132 - - - 0.0