Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1161 ATGAATTTGAACGCAGTCGTTTCCGCCATTGCAATTGCTCTGTTAAGTTCCGCAACCAGGTGCATTATCTCCGATGATCGCCTCCTCGTCAACATGACTTTAGTTCATACCGCCTCCGCTCTCCAAGCTTTTTGCCTGGACGGAAGTTCGCCGGCGTATCATTTCAACAGGGGATTCGGTGCCGGAGCACAAAACTGGCTCTTACAATTCGAGGGTGGTGGGTGGTGCAATGACATTGAATCGTGTTTGGACAGAGCTTATACGAGAAGAGGATCCACTCGTTATATGAACAAGTGGGCGGTCTTTTCTGGAATCCTTAGTAATAATGCTTCTCGTAATCCAGACTTCTACAATTGGAACCGTGTGAAGTTGAGATACTGTGATGGAGCCTCATTCGCTGGAGATACCATTTTTGACAATGGGACATCGTTGCTTTATTTCAAAGGGCAAAAGATTTGGGAGGCAATAATACTTGACCTTCTACCTAAAGGTTTGGGCCATGCACGTAAGGCTCTGCTTTCTGGTTGCTCTGCCGGGGGTTTGGCAACTTTTCTTCACTGCGACAACTTTACAAATTATTTGCCTAAGAATACTAGCGTGAAATGCTTGAGTGATGCTGGATTCTTTCTTGATGTGAGAGATATAAGTTTGAACCGCACTATGAGGTCCTTCTACAAAGATCTTGTTACTCTACAGGGTGTGGAGAAAAATCTGGATAAAAACTGCACCTCTTCTCTTCATAAGTTTCCCGAGTTGTGCATTTTCCCTCAGTATGCTCTCAGATATATAACAACACCATATTTCATATTGAACTCAGCCTATGACGTATTCCAATTCCACCACATATTGGTGCCGCCTTCTGCCGATTTGAGGGGACACTGGAACCGCTGCAAACTGAATCCAGCCGCTTGTAACACAAACCAGATAGAAATATTGCAAGGTTTTCGAGCTGATATGTTGGAAGCACTGGGAGAATTTTTGGCGAATTCAGGAAGAGGAGGGATGTTCATCAATTCATGCTTTGCTCATTGCCAAAGTGAATCACAAGATACATGGTTTGCTGATGACTCACCCCGAATACACAACAAGAGCATAGCTGAAGCAGTTGGAGATTGGTATTTTAGCAGAAGGGCAACCAAGGAGATTGATTGTGCATATCCATGTGATATTACCTGCCATAATCTTATTCCTAGCCTCTTAAGGCTTAAAGAAGATTCAAACATGTACAGATAG 1233 43.71 MNLNAVVSAIAIALLSSATRCIISDDRLLVNMTLVHTASALQAFCLDGSSPAYHFNRGFGAGAQNWLLQFEGGGWCNDIESCLDRAYTRRGSTRYMNKWAVFSGILSNNASRNPDFYNWNRVKLRYCDGASFAGDTIFDNGTSLLYFKGQKIWEAIILDLLPKGLGHARKALLSGCSAGGLATFLHCDNFTNYLPKNTSVKCLSDAGFFLDVRDISLNRTMRSFYKDLVTLQGVEKNLDKNCTSSLHKFPELCIFPQYALRYITTPYFILNSAYDVFQFHHILVPPSADLRGHWNRCKLNPAACNTNQIEILQGFRADMLEALGEFLANSGRGGMFINSCFAHCQSESQDTWFADDSPRIHNKSIAEAVGDWYFSRRATKEIDCAYPCDITCHNLIPSLLRLKEDSNMYR 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55733883 55737721 - Conep01aG0121000.1 Cone1ag1161 431852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1161 410 Pfam Pectinacetylesterase 26 377 IPR004963 GO:0016787(InterPro)
Cone1ag1161 410 PANTHER NOTUM-RELATED 20 395 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0309 Cone-Chr10:1465759 Cone1ag1161 Cone-Chr1:55733883 5.94E-65 dispersed
Cone1ag1161 Cone-Chr1:55733883 Cone5ag0108 Cone-Chr5:497092 4.07E-153 dispersed
Cone1ag1161 Cone-Chr1:55733883 Cone1ag1586 Cone-Chr1:57518332 8.75E-155 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1161 K19882 - mdm:103439776 657.136