Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1219 ATGTTTCTGTTTCTTCTTTTTACCGTGTTTATCTCTACTGTCATTTTATCCTTCTTCCTGTCCCTCCGAGTCTTATGTTTCCGGCGGTTTAACTTACCGCCTGGAAATCTAGGCCTACCCTTTATCGGGGAGACACTTCAGCTTATCTCAGCTTACAAGACTGAGAACCCTGAACCATTCATCGACCAGAGGGTGAAGCGATTCGGTCCGGTATTCACCACCCACTTGTTTGGTGAGCCTACGGTGTTCTCTACTGATCCGGAAACGAACCGGTTCATTTTGCAGAACGAAGGGAAGCTCATCGAGTCGAGCTATCCTAGCTCGATATCGAATTTATTAGGAAGGCACTCTTTGCTTATCATGACTGGAAATCTTCATAAGAAAATGCATTCCTTAACTATGAGCTTCGCTAACTCTTCCATTATTCGGGATCATTTTCTGGTTGATATAGACCGGTTGATCCGGCTCAGCTTGGATTCCTGGGCCGGCAAGATCTATCTTATGGAAGAAGCCAAGAAGATAACATTTGAGCTAGCAGTGAAGCAGCTTATGAGCTTTGATCCAGGAGAATGGACGGAGAGTTTAAGGAAAGAATATGTGCTTGTTATTGAGGGGTTTTTCACTGTTCCGTCTTCTCTCTTGTCCTCAACCTATAGGAGAGCAATTAAGGCTAGGAGTAAGGTAGCGGAGGCGTTGAGTTTGGTAGTGAGGCAAAGGAGAGAAGAGAGGATGAGGAAAGAGAGTGAAGAAGGGAAGTTTAGGATGGAGAAGAAGAATAATAACATGCTGGAAGCTCTGTTGGCATCAGACGACGGGTTAAGTGATGAGCAGATCGTGGATTTCTTGCTGGCTCTACTCGTTGCTAGTTATGAAACTACCCCTACTATCATGACCCTTGCTGTTAAGTTCCTCACCGAGACACCTCTTGCTCTATCTCAACTCAAGGCAGAGCACGAGCAAATAAGGGCAAACAAAACCCAATCTGATGCTCTTGAGTGGAATGATTACAAGTCCATGCCATTCACTCAATGTGTTGTAAATGAGACTTTACGGAGCGCTAACATCATCAGTGGCGTATTTAGGCGAGCTAAGACCGACATCCATATCAAAGGTTATACGATTCCAAAAGGATGGAAGGTTTTTGCCTCTTTTCGTGCCGTACATTTGCATCCGGATTACTTCAAAGATGCTCGCTCTTATAATCCATGGAGATGGCAGAGCACCTCCGGAATGACGACAACCAGCCTGGTGAATGTGTTCACACCGTTTGGAGGAGGTCCGAGGCTGTGCCCGGGTTATGAGCTTGCTAGAGTTGAACTCTCAGTTTTTCTTCACCACCTTGTTACCAGGATGAGTTGGGTTCCAGCTGAAGATGATAAGTTGGTGTTCTTCCCGACGACGAGGACACAGAAGCGTTATCCGATCAATGTGTTTCATAATGAAAACAGTAGTTGA 1455 45.36 MFLFLLFTVFISTVILSFFLSLRVLCFRRFNLPPGNLGLPFIGETLQLISAYKTENPEPFIDQRVKRFGPVFTTHLFGEPTVFSTDPETNRFILQNEGKLIESSYPSSISNLLGRHSLLIMTGNLHKKMHSLTMSFANSSIIRDHFLVDIDRLIRLSLDSWAGKIYLMEEAKKITFELAVKQLMSFDPGEWTESLRKEYVLVIEGFFTVPSSLLSSTYRRAIKARSKVAEALSLVVRQRREERMRKESEEGKFRMEKKNNNMLEALLASDDGLSDEQIVDFLLALLVASYETTPTIMTLAVKFLTETPLALSQLKAEHEQIRANKTQSDALEWNDYKSMPFTQCVVNETLRSANIISGVFRRAKTDIHIKGYTIPKGWKVFASFRAVHLHPDYFKDARSYNPWRWQSTSGMTTTSLVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRMSWVPAEDDKLVFFPTTRTQKRYPINVFHNENSS 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55977119 55980083 - Conep01aG0126800.1 Cone1ag1219 431910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1219 484 SUPERFAMILY Cytochrome P450 25 477 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1219 484 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1219 484 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1219 484 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1219 484 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1219 484 PRINTS E-class P450 group I signature 430 453 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1219 484 PRINTS E-class P450 group I signature 420 430 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1219 484 PRINTS P450 superfamily signature 430 441 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1219 484 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1219 484 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1219 484 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1219 484 FunFam Cytochrome P450 90A1 22 480 - -
Cone1ag1219 484 CDD CYP90-like 64 479 - -
Cone1ag1219 484 Gene3D Cytochrome P450 25 479 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1219 484 PANTHER CYTOCHROME P450 26 31 451 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Cone1ag1219 484 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone1ag1219 484 Pfam Cytochrome P450 33 134 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1219 484 Pfam Cytochrome P450 210 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0278 Cone-Chr14:1274806 Cone1ag1219 Cone-Chr1:55977119 4.70E-71 dispersed
Cone16ag0957 Cone-Chr16:9623590 Cone1ag1219 Cone-Chr1:55977119 3.39E-98 dispersed
Cone1ag1219 Cone-Chr1:55977119 Cone8ag0806 Cone-Chr8:8116467 1.07E-121 dispersed
Cone13ag0373 Cone-Chr13:3396909 Cone1ag1219 Cone-Chr1:55977119 9.27E-94 transposed
Cone9ag0757 Cone-Chr9:3623858 Cone1ag1219 Cone-Chr1:55977119 6.89E-91 transposed
Cone1ag1219 Cone-Chr1:55977119 Cone11ag1187 Cone-Chr11:8999765 6.15E-179 wgd
Cone1ag1219 Cone-Chr1:55977119 Cone5ag0206 Cone-Chr5:850322 2.28E-270 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1219 K09588 - rcu:8261035 727.628