Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag1260 | ATGGCGAATCCATGGTGGGCTGGAAATGTAGCCATGAGAGGTGGTGTGGACCCCATATCTCCATCTCCTTCCCTCCAACTCAAGAACCCAGAAGATCAGCAGCAGCAACAACAACAACATGGGTCGGCGGGATTGAACCGCCCCTTCGTTCTAATCCAAAGAGATCAGGAAACGACTACAGATAGTAGCAGAAGCAACCCAACCAACTCCGCCACAAGAAAAAGAACCCTGGAAGACGATGAAGTAAGCCAAGAAAACAACCAACCAGTCTCCACTCCCCAAGACAGCACCGAACCGGGCTCCAACAGTGCCAGCTCATCCCGCCGCCCTCGTGGCCGCCCTGCCGGGTCCAAAAACAAGCCAAAACCACCCGTCGTAGTCGCCAAAGAAACCCCAAATTCTCTAAGAAGCCACGTGTTGGAAATCAGCAGTGGGACCGACATTGTAGAGAGCATTGCCACCTTTGCTCAAAGCCGCCATAGAGGAGTCTCGGTCCTTAGCGGCAGCGGCATTGTGACCAATGTTACTTTTCGGCAACCGGCTGCACCTGGTGGAGTTATCTCCCTCCAAGGCAGGTTTGAGATATTGTCTTTATCCGGAGCATTCCTGCCCGCCCCGTCCCCGCCTGGGGCAAGTGGTCTGACCGTGTATCTTGCCGGTGGTCAAGGGCAGGTCGTTGGCGGTACTGTGGTGGGTGCACTCACGGCGTCCGGGCCAGTTATGGTGATTGCAGCCACATTTACGAATGCAATGTTTGAGAGATTGCCGTTTAATGATCCGGATAATGAGGTGGTGACACCCCAAGATGGTATGCGATCTGCTGTGGTTAATTTGGGGACTACGGGAAATTCGACGTCTCGGGGAATGAACGAGGAACCTCCAGCTTCTATTGCTGCTGCTGCTGCTGTTTCAATGGTGGCACCTATGTACAATTGGGCATCGAATGATCAGACGCCGAACCATGATGGGTTTTGGAGTACTCCTGCTAGGCCTCCTTCCTCTAATTACTGA | 1011 | 53.41 | MANPWWAGNVAMRGGVDPISPSPSLQLKNPEDQQQQQQQHGSAGLNRPFVLIQRDQETTTDSSRSNPTNSATRKRTLEDDEVSQENNQPVSTPQDSTEPGSNSASSSRRPRGRPAGSKNKPKPPVVVAKETPNSLRSHVLEISSGTDIVESIATFAQSRHRGVSVLSGSGIVTNVTFRQPAAPGGVISLQGRFEILSLSGAFLPAPSPPGASGLTVYLAGGQGQVVGGTVVGALTASGPVMVIAATFTNAMFERLPFNDPDNEVVTPQDGMRSAVVNLGTTGNSTSRGMNEEPPASIAAAAAVSMVAPMYNWASNDQTPNHDGFWSTPARPPSSNY | 336 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 56147160 | 56148187 | + | Conep01aG0131000.1 | Cone1ag1260 | 431951 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag1260 | 336 | MobiDBLite | consensus disorder prediction | 317 | 336 | - | - | |
Cone1ag1260 | 336 | MobiDBLite | consensus disorder prediction | 22 | 44 | - | - | |
Cone1ag1260 | 336 | CDD | DUF296 | 136 | 219 | IPR005175 | - | |
Cone1ag1260 | 336 | Gene3D | - | 135 | 264 | - | - | |
Cone1ag1260 | 336 | MobiDBLite | consensus disorder prediction | 83 | 112 | - | - | |
Cone1ag1260 | 336 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 132 | 261 | - | - | |
Cone1ag1260 | 336 | ProSiteProfiles | PPC domain profile profile. | 132 | 268 | IPR005175 | - | |
Cone1ag1260 | 336 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 65 | 331 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cone1ag1260 | 336 | FunFam | AT-hook motif nuclear-localized protein | 135 | 263 | - | - | |
Cone1ag1260 | 336 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 136 | 248 | IPR005175 | - | |
Cone1ag1260 | 336 | MobiDBLite | consensus disorder prediction | 1 | 131 | - | - | |
Cone1ag1260 | 336 | MobiDBLite | consensus disorder prediction | 52 | 72 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag1260 | Cone-Chr1:56147160 | Cone3ag0681 | Cone-Chr3:3469813 | 5.35E-73 | dispersed | |
Cone1ag1260 | Cone-Chr1:56147160 | Cone11ag1145 | Cone-Chr11:8815268 | 4.00E-50 | wgd | |
Cone1ag1260 | Cone-Chr1:56147160 | Cone18ag0437 | Cone-Chr18:2129411 | 2.98E-52 | wgd | |
Cone1ag1260 | Cone-Chr1:56147160 | Cone5ag0246 | Cone-Chr5:1041605 | 1.11E-205 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag1260 | - | - | - | 0.0 |