Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1287 ATGGAAAATGAGGATATGGCTGATAAGCTGGAATGCATACAACAGATATGCAATAATATTCTGGAGTGCACAAACCAGTATTCGTTTGCAAAAATGGATGATCAACAGGTCTATTCTCTTATGAGGCTCAGGGAATTATCCCATCGTGCTGTTATTGGTCAAGACACAAGGGTGACAGAGAATGACCTGACTAGCACTCTTCGATTTTATATTAACAGGATGGGAAGCAGATGCAAGGCAATTCTTGACGTTGTAGTTATGATCTCGGATGATGGCTTAGATGAGAAGCAAATGCAGTTGCTTCAGAAATTGAAGGAACTCTTATGTGGGATTATAAAAGATGCAAAAATGGAACCTTCTATTCCTGATGAATATGTCGATCCGTGGATTTTAGAGTTCCCAGAGGTTGAAGAAGAAGCAACATACACCATGAGCGAGGATGTTCGGTTTCAGGTGGAACAGAGCATGCTGGACCTAATTGTTCAAGAAGAAGATTTAGAGGTTGGAGATATGTTAATAAGAAATAACAACAATCAGATATCACATATTCTCAACTCAGTTACTTGGCCTGAAAATGGCTCCATAACCTTGGAGTGGGTTTTGGACTTGACGCACATCCTTGAGCAATCTTCATGGAAAACCTCTCCCTCTGAGTTTCAACTTGTCATGCCCTTTTATGTGGTGAATAAACTACTCGACACAGTTGCAAGTGTTTTACACAAGGAACCAAATTGTGTGGAAATTAATTGCCATGAAGATGGTTCAAAAGTTGTAGTAGTAGGTGACATTCATGGACAATATCATGACTTACTCCATCTCTTTGAACTTGCTAACTACCCATCCGAAAACCAGTTTTATGTTTTCAATGGAGATTATGTAGATAGAGGAGCTTGGGGATTAGAGGTTTTTCTGGTCTTGTCAGCCTGGAAGGTGTTGAAACCTGATAGGGTATTTATACTACGTGGAAGTCATGAATCAGGACATTGTACATCAGCATATGGTTTTGAGAAAGAGGTAAGGGCCAAAGTTGGTGAGCAAGGCAAACAAGTGTATAACAAGTGCTTGGAAACCTTTAAAGAGCTTCCATTGGCCTCAATTGTAGCTGGGAAAGTATATATTACTCATGGAGGGCTCTTCCGAAAGAGGTCCTCTACCCCTTCGCAGATTCCCAAGAGAAAGAAGACACGGAATCTAGAAGTTGGTTCGTTGGATGATTTGTTTGAGATTGAGCGGTATCTTGTAGATGCTCCCACTTCAGATGATGATCCAAATATATTGTTGAGTGATGTATTATGGTCTGATCCATCGATTAAAGATGGTCTAAGGAGAAACAGAGATCAAGCAGTTGGGCTAAAATGGGGCCCTGATTGCACAGAGGCCTTTTTGAAACAATCTAAGTTGAAGGTGATTATAAGATCACATGAAGGACCCGATGAAAGGGATGGCCAAGATATTCTTGGTGATATGTTAAGTGGGTATTGCACGGATCATGATGGAGAATCTGGGAAGTTATTTACTCTGTTCAGTGCTCCCGATTACCCACAGTTTAGTAAGAAGAGGTACAACAATGAAGGAGCTTATGCTGTATTGGAACCTCCAAATTTTGAAAATCCTTCTTTTTGCTCCTTTGAAGCTGTAGATAGACCAAAGATAGATGCATATTTTAGTGATGAAGATGATGAATCAACGTCTGGGGACCAAGACTTGCCATTGACAGACGAACAAGCCCCTTCTTTTAGTAGATCTTCAACTGAAGAATCTAATCCACCTAGACTGAATCCCGAGGTAAACTTTGCGGCATTGGGTATTGAAAATCCACCTCCATGGAGTATTACATTAACAGACGATGAAGATGGGCCCCAGGTCATTAAAATTCCAAGGTCTTCCGAGGTAGAGGGATTGCCTTTGCCCCCCAACTTAGAGGAGCCTCACAAGGCTGCTTACGAGTACTTTTTGGAGCTCATTGCTGGACTAAAGCTTCTGCTGCAAAACAGGGTGAGCTAG 2004 41.32 MENEDMADKLECIQQICNNILECTNQYSFAKMDDQQVYSLMRLRELSHRAVIGQDTRVTENDLTSTLRFYINRMGSRCKAILDVVVMISDDGLDEKQMQLLQKLKELLCGIIKDAKMEPSIPDEYVDPWILEFPEVEEEATYTMSEDVRFQVEQSMLDLIVQEEDLEVGDMLIRNNNNQISHILNSVTWPENGSITLEWVLDLTHILEQSSWKTSPSEFQLVMPFYVVNKLLDTVASVLHKEPNCVEINCHEDGSKVVVVGDIHGQYHDLLHLFELANYPSENQFYVFNGDYVDRGAWGLEVFLVLSAWKVLKPDRVFILRGSHESGHCTSAYGFEKEVRAKVGEQGKQVYNKCLETFKELPLASIVAGKVYITHGGLFRKRSSTPSQIPKRKKTRNLEVGSLDDLFEIERYLVDAPTSDDDPNILLSDVLWSDPSIKDGLRRNRDQAVGLKWGPDCTEAFLKQSKLKVIIRSHEGPDERDGQDILGDMLSGYCTDHDGESGKLFTLFSAPDYPQFSKKRYNNEGAYAVLEPPNFENPSFCSFEAVDRPKIDAYFSDEDDESTSGDQDLPLTDEQAPSFSRSSTEESNPPRLNPEVNFAALGIENPPPWSITLTDDEDGPQVIKIPRSSEVEGLPLPPNLEEPHKAAYEYFLELIAGLKLLLQNRVS 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56254101 56258220 + Conep01aG0133900.1 Cone1ag1287 431978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1287 667 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 179 555 IPR051134 -
Cone1ag1287 667 MobiDBLite consensus disorder prediction 555 593 - -
Cone1ag1287 667 SMART pp2a_7 223 547 IPR006186 GO:0016787(InterPro)
Cone1ag1287 667 SUPERFAMILY Metallo-dependent phosphatases 218 554 IPR029052 -
Cone1ag1287 667 MobiDBLite consensus disorder prediction 568 591 - -
Cone1ag1287 667 Gene3D - 175 588 IPR029052 -
Cone1ag1287 667 Pfam Calcineurin-like phosphoesterase 256 475 IPR004843 GO:0016787(InterPro)
Cone1ag1287 667 PRINTS Serine/threonine phosphatase family signature 356 382 IPR006186 GO:0016787(InterPro)
Cone1ag1287 667 PRINTS Serine/threonine phosphatase family signature 409 436 IPR006186 GO:0016787(InterPro)
Cone1ag1287 667 PRINTS Serine/threonine phosphatase family signature 319 343 IPR006186 GO:0016787(InterPro)
Cone1ag1287 667 PRINTS Serine/threonine phosphatase family signature 286 313 IPR006186 GO:0016787(InterPro)
Cone1ag1287 667 PRINTS Serine/threonine phosphatase family signature 503 519 IPR006186 GO:0016787(InterPro)
Cone1ag1287 667 PRINTS Serine/threonine phosphatase family signature 256 283 IPR006186 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1287 Cone-Chr1:56254101 Cone8ag0921 Cone-Chr8:8891620 4.60E-136 dispersed
Cone1ag1287 Cone-Chr1:56254101 Cone11ag1125 Cone-Chr11:8710754 1.54E-279 wgd
Cone1ag1287 Cone-Chr1:56254101 Cone18ag0453 Cone-Chr18:2207524 7.87E-282 wgd
Cone1ag1287 Cone-Chr1:56254101 Cone5ag0273 Cone-Chr5:1156254 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1287 K04460 - csv:101211172 763.837