Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone1ag1290 | ATGAAGGAGATTGCTGAGGCTTTTCTCGTCTCAATTGTGAAGAATGCTGTTGTCACTGCTACCAAGGATGCCGGAGTCATTGCTGGCCTCAATGTCATGCGTATCATCAATGAACCCACTGCTGCAGCCATTGCTTATGGTCTTGCCAAGAAGTCCTCTAGCACGGGAGAGAAGAATGTGTTGATCTTTGACCTTGGTGGTGGTACTTTTGATGTGTCATTGCTCACTATTGAGGAGGGTATCCTTGAGGTGAAGGCCACAGCAGGTGACATTCACCTTGGAGGAGAGGACTTTGACAACAGAATGGTCAATCACTCTGTTCAGGAGTTTAAGAGGAAAAACAAGAAGGATATTTCTGGAAATCCCAGAGCTCATAGAAGGTTGAGAACTGCTTGTGAAAGGGCAAAGCGGACTCTTTCATCTACCGCTCAGACTACCATTGAGATTGAATCTTTATTTGAGGGAATTGACTTCTATTCAACCATCACCCGTGCAAGATTCGAGGAGCTTAATATGGGTCTCTTTAGGAAGTATGAGGCAGTAGCTTATGGTGCTACTGTTCAGGTTGCCATCTTGAGTGGTGAAGGTAAAGAGAAAGTTCAAGACCTCCTCCTCTTGGATGTCACTCCTCTATCTCTTGGATTGGAAACTGCTGGAGGTGTAATGACTGTGTTGATTCCGAGAAACACCACCATTCCGACCAAAAAGGAGGAAGTCTTCTCCACCTACTCAGACAACCAGCCTGGTGTCTTTGATTCAAGTATTTGA | 768 | 45.31 | MKEIAEAFLVSIVKNAVVTATKDAGVIAGLNVMRIINEPTAAAIAYGLAKKSSSTGEKNVLIFDLGGGTFDVSLLTIEEGILEVKATAGDIHLGGEDFDNRMVNHSVQEFKRKNKKDISGNPRAHRRLRTACERAKRTLSSTAQTTIEIESLFEGIDFYSTITRARFEELNMGLFRKYEAVAYGATVQVAILSGEGKEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEEVFSTYSDNQPGVFDSSI | 255 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 56259953 | 56260913 | - | Conep01aG0134200.1 | Cone1ag1290 | 431981 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone1ag1290 | 255 | Gene3D | - | 51 | 182 | - | - | |
| Cone1ag1290 | 255 | SUPERFAMILY | Actin-like ATPase domain | 1 | 49 | IPR043129 | - | |
| Cone1ag1290 | 255 | FunFam | Heat shock 70 kDa | 94 | 177 | - | - | |
| Cone1ag1290 | 255 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 202 | 251 | IPR029047 | - | |
| Cone1ag1290 | 255 | SUPERFAMILY | Actin-like ATPase domain | 55 | 185 | IPR043129 | - | |
| Cone1ag1290 | 255 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 198 | 251 | IPR029047 | - | |
| Cone1ag1290 | 255 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 62 | 75 | IPR018181 | - | |
| Cone1ag1290 | 255 | FunFam | heat shock 70 kDa protein-like | 1 | 56 | - | - | |
| Cone1ag1290 | 255 | Gene3D | - | 3 | 50 | - | - | |
| Cone1ag1290 | 255 | Gene3D | Actin; Chain A, domain 4 | 94 | 177 | - | - | |
| Cone1ag1290 | 255 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 178 | 250 | IPR013126 | GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro) | |
| Cone1ag1290 | 255 | FunFam | Heat shock 70 kDa protein | 57 | 123 | - | - | |
| Cone1ag1290 | 255 | Pfam | Hsp70 protein | 179 | 250 | IPR013126 | GO:0005524(InterPro)|GO:0140662(InterPro) | |
| Cone1ag1290 | 255 | Pfam | Hsp70 protein | 1 | 177 | IPR013126 | GO:0005524(InterPro)|GO:0140662(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone1ag1290 | Cone-Chr1:56259953 | Cone5ag1163 | Cone-Chr5:5226230 | 5.87E-134 | dispersed | |
| Cone1ag1290 | Cone-Chr1:56259953 | Cone5ag0274 | Cone-Chr5:1161132 | 1.88E-138 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone1ag1290 | K03283 | - | rcu:8268250 | 400.979 |