Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1319 ATGGCGCTCGAGGTAGCTGTCAAGGCCGCTGCTGGTGCTCCTCATCTACTTGGAGACTGCCCTTTCTGCCAAAGGGTGCTCTTAACTTTGGAGGAGAAAAAGGTTCCCTACAAATTGCACCTCATCAACCTCTCAGACAAACCTCAATGGTTTTTGGATGTGAATCCAGAAGGAAAAGTGCCGGTTGTGAAGTTTGATGACAAATGGGTTTCTGATTCTGATGTCATTGTTGGAATTCTTGAGGAAAAATACCCTGAACCTTCTCTCACGCATCCTCCTGAATTTGCTTCTGTGGGGTCAAAGATATTCATTGCTTTTGTGAAATTTGTTAAGAGCAAGGATCCAAGTGATGGATCAGAGCAGGCTCTGCTCGACGAGTTGAAGGCATTGGACGAGCACCTTAAAGCTCATGGCCCATATATTACTGGAGAAAAGGTCACAGCCATTGATTTGAGTCTAGCACCGAAGCTTTATCATCTGGATGTGGCTCTTGGCCATTTCAAGAATTGGACTGTCCCTGAAAACCTGACCCGCTTCCATAAGTACAAACAGTTGCTCTTTGCTCGGGAATCGTTTGAGAAGACCAAGCCACCCGGAAAGGAGTATGTAATTGCTGGATGGGAGCCTAAGGTCAATCCATGA 642 46.11 MALEVAVKAAAGAPHLLGDCPFCQRVLLTLEEKKVPYKLHLINLSDKPQWFLDVNPEGKVPVVKFDDKWVSDSDVIVGILEEKYPEPSLTHPPEFASVGSKIFIAFVKFVKSKDPSDGSEQALLDELKALDEHLKAHGPYITGEKVTAIDLSLAPKLYHLDVALGHFKNWTVPENLTRFHKYKQLLFARESFEKTKPPGKEYVIAGWEPKVNP 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56385452 56387566 - Conep01aG0137300.1 Cone1ag1319 432010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1319 213 Gene3D Glutaredoxin 1 89 - -
Cone1ag1319 213 SFLD Glutathione Transferase (cytosolic) 19 184 IPR040079 -
Cone1ag1319 213 CDD GST_N_family 20 77 - -
Cone1ag1319 213 FunFam Glutathione S-transferase DHAR3 chloroplastic 1 89 - -
Cone1ag1319 213 SUPERFAMILY GST C-terminal domain-like 83 204 IPR036282 -
Cone1ag1319 213 SFLD Main (cytGST) 19 184 - -
Cone1ag1319 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Cone1ag1319 213 FunFam Glutathione S-transferase DHAR3, chloroplastic 90 213 - -
Cone1ag1319 213 Pfam Glutathione S-transferase, N-terminal domain 20 82 IPR004045 -
Cone1ag1319 213 Gene3D - 90 213 - -
Cone1ag1319 213 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 3 210 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro)
Cone1ag1319 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 66 213 IPR010987 -
Cone1ag1319 213 Pfam Glutathione S-transferase, C-terminal domain 120 180 - -
Cone1ag1319 213 SUPERFAMILY Thioredoxin-like 18 87 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0611 Cone-Chr16:7832131 Cone1ag1319 Cone-Chr1:56385452 4.02E-90 dispersed
Cone1ag1319 Cone-Chr1:56385452 Cone2ag0396 Cone-Chr2:2082661 1.04E-58 dispersed
Cone1ag1319 Cone-Chr1:56385452 Cone11ag1106 Cone-Chr11:8611417 5.49E-74 wgd
Cone1ag1319 Cone-Chr1:56385452 Cone18ag0470 Cone-Chr18:2282995 2.03E-29 wgd
Cone1ag1319 Cone-Chr1:56385452 Cone5ag0301 Cone-Chr5:1270905 2.00E-131 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1319 K21888 - mdm:103435916 363.614