Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1330 ATGGCTTCGCTTTTGAAAGGAATCTACAGCTACAGCTACGGTTCTGCATTCGCCACTACTGGTTTGTCTTCTCCACCAGATAGTCCCTTATTAACTTCCTCCCTCTCCTTCTCCTCCAAGAAGAAACCAGCAAGCTTCCAAATTATCACCTTATCTCCCCTTTCTAAGCTTCATCACTTCACTGTATCTGCAACAATGGCCTCTGGAAATGCTGTTCAAGAGGTACTTCCTCCAGCTCTCACTTCTACTTCAGAACCGCCTTCTGTTCTCTTCGATGGAACTCCGAGGTTGTATATATCTTACACATGCCCTTATGCTCAGCGTACTTGGATTACCCGGAACTGTAAGGGATTGCAGAAAAAGATCCAGTTGGTTCCTATCGATCTTCAGGATAGACCATCTTGGTACAAGGAAAAAGTTTACCCACCTAACAAGGTGCCATCACTTGAACACAATAATGAAGTCAAAGGAGAGAGCCTCGATTTGATTAAATATATCGACAGCAACTTTGAAGGGCCTTCCCTATTCCCTGATGATCCTGCAAAGAGAGAGTTTGCAGAAGAGTTGCTGTCCTACACCGATTCGTTCAGTAGAGCTGTAGTGTCTTCCATCAAAGGAGATGGAGATGAAGCCAATGGTGCATTTGACTACCTTGAATCTACTCTTTCCAAGTTTGATGATGGTCCTTTCTTCCTCGACCAGTTCAGCCTAGTGGATATAGCTTATGCTCCCTTCCTTGAAAGATACGTTCCCCTCTTGGCAGAAGTAAAGAAGCATGATATCACCATAGGCAGACCTAGAATAGCAACTTGGATCGAGGAGATTAACAAAATAGAGGCTTACAAGCAAACCAAGCGCGACACAAAAGAACTTGTTGAAGGGCTTAAGAAACGCTTCGGGCTCAGCTCTCTTTAG 915 44.37 MASLLKGIYSYSYGSAFATTGLSSPPDSPLLTSSLSFSSKKKPASFQIITLSPLSKLHHFTVSATMASGNAVQEVLPPALTSTSEPPSVLFDGTPRLYISYTCPYAQRTWITRNCKGLQKKIQLVPIDLQDRPSWYKEKVYPPNKVPSLEHNNEVKGESLDLIKYIDSNFEGPSLFPDDPAKREFAEELLSYTDSFSRAVVSSIKGDGDEANGAFDYLESTLSKFDDGPFFLDQFSLVDIAYAPFLERYVPLLAEVKKHDITIGRPRIATWIEEINKIEAYKQTKRDTKELVEGLKKRFGLSSL 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56437501 56440128 + Conep01aG0138500.1 Cone1ag1330 432021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1330 304 Gene3D - 172 302 - -
Cone1ag1330 304 FunFam Glutathione S-transferase L2, chloroplastic 67 171 - -
Cone1ag1330 304 PANTHER GLUTATHIONE S-TRANSFERASE L1 71 299 IPR044629 GO:0004364(PANTHER)|GO:0004364(InterPro)|GO:0010731(PANTHER)
Cone1ag1330 304 FunFam Lambda class glutathione S-transferase 172 302 - -
Cone1ag1330 304 CDD GST_C_Lambda 179 296 - -
Cone1ag1330 304 SUPERFAMILY Thioredoxin-like 83 175 IPR036249 -
Cone1ag1330 304 Pfam Glutathione S-transferase, C-terminal domain 211 273 - -
Cone1ag1330 304 Coils Coil 278 298 - -
Cone1ag1330 304 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 93 174 IPR004045 -
Cone1ag1330 304 Pfam Glutathione S-transferase, N-terminal domain 97 173 IPR004045 -
Cone1ag1330 304 Gene3D Glutaredoxin 67 171 - -
Cone1ag1330 304 SUPERFAMILY GST C-terminal domain-like 170 300 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1330 Cone-Chr1:56437501 Cone3ag0300 Cone-Chr3:1547738 3.21E-76 dispersed
Cone1ag1330 Cone-Chr1:56437501 Cone10ag0272 Cone-Chr10:1296589 2.29E-108 wgd
Cone1ag1330 Cone-Chr1:56437501 Cone13ag1302 Cone-Chr13:9718133 4.92E-97 wgd
Cone1ag1330 Cone-Chr1:56437501 Cone3ag0299 Cone-Chr3:1542745 2.45E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1330 K00799 - cit:102607762 384.03