Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag1332 | ATGGCTTGGTTTCTCTGTTCTGGAAATCCGAATAAGAAAGCGAAGAAGCTAAGTAAGAACCCAGAGGATCAGATCCTGTCATCAACTCCAGAAAAGCTTAAAGTAAATCCGGCCATGATTATGAAGGAGTCTAAGGGTGAAAAATCCGAACACATTGGAGCACATACGTTTACATTCCGAGAATTAGCAAATGCAACGAGAAATTTCCAAGCAGATTGTCTTCTAGGCGAAGGAGGTTTTGGCCGAGTCTATAAAGGACGCTTGGATAGCACAAACCAGGTTGTAGCAATAAAGCAACTCGACCGAAACGGGCTTCAAGGAAACAGAGAATTCCTTGTAGAAGTACTAATGTTAAGCCTCCTTCACCATCCTAATCTCGTCAACCTAATCGGCTACTGTGCCGATGGAGATCAAAGACTCTTGGTTTATGAATACATGCCGCTTGGCTCTTTAGAAGACCATCTACACGATCTTCCACATGATAAAACACGGCTCGATTGGAATATGCGGATGAAAATAGCGGCTGGTGCTGCAAAGGGCTTGGAATATTTACACGACAAAGCTAACCCGCCTGTCATTTATCGCGATTTAAAGTGCTCAAACATTTTGCTAGGTGAAGACTATCAACCCAAGCTATCCGACTTTGGCTTGGCTAAATTGGGGCCCGTGGGGGATAAAACCCACGTGTCAACAAGAGTTATGGGAACTTATGGATATTGTGCGCCTGAATATGCCATGACCGGTCAACTCACTTTGAAATCTGACGTTTATAGTTTTGGAGTTGTGCTTCTAGAAATTATTACGGGTAGAAAAGCAATTGACAATTCACGAGCGGCAGGGGAACATAATTTAGTAGCATGGGCACGGCCATTGTTTAAGGATAGAAGGAAATTCGCACAAATTGTGGATCCATTGTTGCAAGGACAGTATCCTGTTAGAGGGTTGTACCAAGCTTTAGCAGTTGCTGCTATGTGTGTTCAAGAACAACCCAGTATAAGACCGCTTATAGCTGATGTCGTAACAGCCCTGACTTATCTTGCTTCCCAGAAATACGATCCGGAAACACAGTCGATCCAAAGCTCCCGATCAAGCTCATTGTCCACTCCTCGATTGAGAAGGGAACAGTTTTGA | 1131 | 43.85 | MAWFLCSGNPNKKAKKLSKNPEDQILSSTPEKLKVNPAMIMKESKGEKSEHIGAHTFTFRELANATRNFQADCLLGEGGFGRVYKGRLDSTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPHDKTRLDWNMRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEDYQPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSRAAGEHNLVAWARPLFKDRRKFAQIVDPLLQGQYPVRGLYQALAVAAMCVQEQPSIRPLIADVVTALTYLASQKYDPETQSIQSSRSSSLSTPRLRREQF | 376 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 56450553 | 56452698 | + | Conep01aG0138700.1 | Cone1ag1332 | 432023 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag1332 | 376 | ProSitePatterns | Protein kinases ATP-binding region signature. | 75 | 98 | IPR017441 | GO:0005524(InterPro) | |
Cone1ag1332 | 376 | FunFam | Serine/threonine-protein kinase PBS1 | 146 | 361 | - | - | |
Cone1ag1332 | 376 | CDD | STKc_IRAK | 75 | 344 | - | - | |
Cone1ag1332 | 376 | SUPERFAMILY | Protein kinase-like (PK-like) | 51 | 350 | IPR011009 | - | |
Cone1ag1332 | 376 | FunFam | Serine/threonine-protein kinase PBS1 | 41 | 145 | - | - | |
Cone1ag1332 | 376 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 192 | 204 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag1332 | 376 | Gene3D | Phosphorylase Kinase; domain 1 | 39 | 145 | - | - | |
Cone1ag1332 | 376 | Pfam | Protein tyrosine and serine/threonine kinase | 72 | 275 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag1332 | 376 | MobiDBLite | consensus disorder prediction | 356 | 376 | - | - | |
Cone1ag1332 | 376 | ProSiteProfiles | Protein kinase domain profile. | 69 | 346 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag1332 | 376 | SMART | serkin_6 | 69 | 346 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag1332 | 376 | PANTHER | OS07G0668900 PROTEIN | 30 | 363 | - | - | |
Cone1ag1332 | 376 | Gene3D | Transferase(Phosphotransferase) domain 1 | 146 | 367 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone14ag0778 | Cone-Chr14:4523716 | Cone1ag1332 | Cone-Chr1:56450553 | 1.08E-191 | dispersed | |
Cone18ag0311 | Cone-Chr18:1529245 | Cone1ag1332 | Cone-Chr1:56450553 | 4.86E-178 | dispersed | |
Cone18ag1447 | Cone-Chr18:9726278 | Cone1ag1332 | Cone-Chr1:56450553 | 4.50E-125 | dispersed | |
Cone1ag1332 | Cone-Chr1:56450553 | Cone7ag0170 | Cone-Chr7:711534 | 1.03E-192 | dispersed | |
Cone1ag0688 | Cone-Chr1:6432681 | Cone1ag1332 | Cone-Chr1:56450553 | 2.64E-34 | wgd | |
Cone1ag1332 | Cone-Chr1:56450553 | Cone10ag0271 | Cone-Chr10:1290438 | 2.55E-205 | wgd | |
Cone1ag1332 | Cone-Chr1:56450553 | Cone11ag1273 | Cone-Chr11:9465606 | 2.54E-177 | wgd | |
Cone1ag1332 | Cone-Chr1:56450553 | Cone3ag0298 | Cone-Chr3:1540435 | 1.33E-200 | wgd | |
Cone1ag1332 | Cone-Chr1:56450553 | Cone5ag0318 | Cone-Chr5:1348653 | 6.43E-259 | wgd | |
Cone1ag1332 | Cone-Chr1:56450553 | Cone5ag1197 | Cone-Chr5:5414199 | 1.12E-167 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82506 | PF00069 | Pkinase | 1.60E-46 | CL0016 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag1332 | - | - | - | 0.0 |