Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag1339 | ATGGAACACATCTTTGATGCCAAAACTGCTCTGAAAACACCATCACCACCAACAATGGCTGCTAATTCTGATCACCATGAGTTTTCTCCTTCCCCACCACCACAGACGCCTGCGACAGCAGTTGTGCTCAGTCCATGCGCCGCCTGTAGAATCCTTCGACGGAGATGCGTCGAGAAATGCGTCTTAGCTCCTTACTTCCCTCCAACTGACCCTCTCAAGTTCACCATTGCTCATCGAGTCTTTGGCGCTAGCAATATCATCAAATTCTTGCAGGAGCTTCCAGAGAGTCAGAGACCAGATGCAGTGAGCAGTATGGTATACGAAGCAAACGCAAGGATCAGAGATCCAGTTTACGGATGCGCCGGCGCAGTATGTCAGCTCCAGAAGCAAGTGAGCGACCTGCAGGCTCAGATAGCCAAGGCTCAAGCCGAGCTGGTCAACATGCAGCTCCAACAAGCCAATTTACTAGCCATATTTTGCATGGAACTAAGACAATCTAATCATCACCTTCATCATCACGATCATGATCAAGATCAACTAATCACCATGGTCGATAATACCATGCAACATCAACCGTACCAGATTGACACAACCTGCTTCCTCGACGACTCCACTTCCGGTACATGGGAAGCGCTCTGGACGTGA | 645 | 49.3 | MEHIFDAKTALKTPSPPTMAANSDHHEFSPSPPPQTPATAVVLSPCAACRILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRPDAVSSMVYEANARIRDPVYGCAGAVCQLQKQVSDLQAQIAKAQAELVNMQLQQANLLAIFCMELRQSNHHLHHHDHDQDQLITMVDNTMQHQPYQIDTTCFLDDSTSGTWEALWT | 214 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 56487374 | 56488318 | + | Conep01aG0139400.1 | Cone1ag1339 | 432030 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag1339 | 214 | ProSiteProfiles | LOB domain profile. | 44 | 145 | IPR004883 | - | |
Cone1ag1339 | 214 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 44 | 175 | - | - | |
Cone1ag1339 | 214 | Pfam | Lateral organ boundaries (LOB) domain | 45 | 142 | IPR004883 | - | |
Cone1ag1339 | 214 | Coils | Coil | 124 | 151 | - | - | |
Cone1ag1339 | 214 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Cone1ag1339 | 214 | MobiDBLite | consensus disorder prediction | 15 | 29 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag1339 | Cone-Chr1:56487374 | Cone8ag1587 | Cone-Chr8:11808670 | 1.91E-42 | dispersed | |
Cone1ag1339 | Cone-Chr1:56487374 | Cone11ag1283 | Cone-Chr11:9521027 | 1.68E-64 | wgd | |
Cone1ag1339 | Cone-Chr1:56487374 | Cone11ag1078 | Cone-Chr11:8438866 | 4.79E-61 | wgd | |
Cone1ag1339 | Cone-Chr1:56487374 | Cone18ag0498 | Cone-Chr18:2433576 | 1.27E-63 | wgd | |
Cone1ag1339 | Cone-Chr1:56487374 | Cone5ag0326 | Cone-Chr5:1378722 | 1.09E-110 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45506 | PF14380 | WAK_assoc | 3.50E-06 | No_clan | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag1339 | - | - | - | 0.0 |