Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1346 ATGGCTTCCAACACATTGATGAGCTATGGGATAGCCACCGTGGCCTTCCCTTCCGTCCTCTCATCCTCCAAATCTAAATTCACGGCCGCGGTACCACTTTCCAGCAGCGGTGCGGCCAATGCCTCCTCTCGATTTGCCATGTCAGCCGAGTGGATGCCTGGCCAGCCCCGCCCGCCTTACCTCGATGGCTCTGCCCCCGGAGACTTTGGGTTTGACCCTCTTGGGCTTGGCGAAGTGCCAGAGAACCTCGAGAGATTTAAGGAGTCCGAACTCATTCACTGCAGATGGGCTATGCTTGCTGTGCCCGGGATTCTAGTACCAGAAGCACTTGGGTTAGGGAACTGGGTGAAGGCGCAGGAGTGGGCAGCAGTGCCAGGTGGGCAAGCCACTTACTTAGGGCAGCCCGTGCCGTGGGGCACCCTCCCTACAATATTGGCCATAGAGTTTCTGGCCATAGCGTTCGTAGAGCACCAGAGAAGCATAGAGAAGGACCCGGAAAAGAAGAAGTACCCAGGCGGTGCGTTTGACCCCTTGGGCTACTCTAAGGACCCAGAGAAGCTAAAGGAGTACAAGGTCAAGGAGATCAAGAACGGACGGCTAGCGCTGTTGGCTTTTGTTGGGTTCTGCGTGCAGCAATCGGCTTACCCTGGGACTGGACCGCTGGAGAACTTGGCCACTCACTTGGCTGACCCGTGGCACAACAACATCGGCGATGTCATTATTCCCAAAGGAATCTTCCCTAATTGA 747 56.09 MASNTLMSYGIATVAFPSVLSSSKSKFTAAVPLSSSGAANASSRFAMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSIEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVIIPKGIFPN 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56525339 56526704 + Conep01aG0140200.1 Cone1ag1346 432037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1346 248 SUPERFAMILY Chlorophyll a-b binding protein 40 241 - -
Cone1ag1346 248 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 15 236 IPR001344 GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Cone1ag1346 248 Pfam Chlorophyll A-B binding protein 58 212 IPR022796 -
Cone1ag1346 248 Gene3D Chlorophyll a/b binding protein domain 52 238 - -
Cone1ag1346 248 FunFam Chlorophyll a-b binding protein, chloroplastic 52 238 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0383 Cone-Chr10:1812105 Cone1ag1346 Cone-Chr1:56525339 2.18E-41 dispersed
Cone1ag1220 Cone-Chr1:55986365 Cone1ag1346 Cone-Chr1:56525339 9.13E-32 dispersed
Cone1ag1346 Cone-Chr1:56525339 Cone2ag0840 Cone-Chr2:34403965 5.61E-48 dispersed
Cone1ag1346 Cone-Chr1:56525339 Cone5ag0333 Cone-Chr5:1408962 4.91E-178 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1346 K08907 - csv:101211428 474.552