Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag1352 | ATGGCTAAGGATTTGCTAGGGGCGGAGCAAGGGTCGTTCTCGGCCAAGGACTACCATGACCCGCCGCCAGCGCCACTCATTGACGCGGCAGAGCTGGGAAAATGGTCATTCTACAGAGCTCTTATTGCAGAGTTCATAGCCACTCTGCTCTTCCTCTACGTCACCGTTTTAACCGTGATCGGATACAAGAGCCAGGCCGATCGAGCTCTCAACGCTGACCCGTGTGGCGGAGTAGGCATTCTTGGCATCGCCTGGGCCTTTGGCGGCATGATCTTCGTCCTTGTATACTGCACGGCTGGCATTTCCGGAGGGCATATTAACCCGGCCGTGACGTTCGGGCTGCTACTAGCTCGAAAGGTGTCGTTGGTTCGGGCGGTTCTGTACATGGTGGCTCAGTGCTTAGGAGCCATAAGTGGTGTGGGTCTGGTCAAGGCTTTTCAAAAGCCTTTCTTTGACAGATATGGAGGTGGCGCTAACGAACTTGCTCCTGGTTATAGCAAAGGTGTCGGATTGAGTGCAGAAATAATCGGCACCTTCGTCCTCGTTTACACCGTTTTCTCTGCTACTGATCCCAAGAGAAATGCCAGAGATTCTCACGTTCCAGTGTTGGCTCCACTCCCGATAGGATTTGCAGTGTTCATGGTTCACTTGGCAACCATTCCGATCACCGGTACAGGCATTAACCCGGCAAGGAGTCTAGGGTCAGCTGTTATCTACAACCAGGAGAAGGCTTGGGATGATCAGTGGATGTTTTGGTTGGGACCTTTTATCGGAGCAGCCATCGCCGCCTTCTATCACCAGTTCATTTTGAGAGCAGGAGCTGCTAAGGTTCTTGGATCGTTTAGGAGCAATCCCCATGTATGA | 864 | 52.55 | MAKDLLGAEQGSFSAKDYHDPPPAPLIDAAELGKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQADRALNADPCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLLLARKVSLVRAVLYMVAQCLGAISGVGLVKAFQKPFFDRYGGGANELAPGYSKGVGLSAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGSAVIYNQEKAWDDQWMFWLGPFIGAAIAAFYHQFILRAGAAKVLGSFRSNPHV | 287 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 56550924 | 56552628 | - | Conep01aG0140900.1 | Cone1ag1352 | 432043 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag1352 | 287 | ProSitePatterns | MIP family signature. | 105 | 113 | IPR022357 | - | |
Cone1ag1352 | 287 | NCBIfam | MIP family channel protein | 43 | 266 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone1ag1352 | 287 | SUPERFAMILY | Aquaporin-like | 32 | 272 | IPR023271 | - | |
Cone1ag1352 | 287 | CDD | MIP | 39 | 269 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone1ag1352 | 287 | Gene3D | Glycerol uptake facilitator protein. | 24 | 287 | IPR023271 | - | |
Cone1ag1352 | 287 | PRINTS | Major intrinsic protein family signature | 87 | 111 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone1ag1352 | 287 | PRINTS | Major intrinsic protein family signature | 209 | 231 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone1ag1352 | 287 | PRINTS | Major intrinsic protein family signature | 249 | 269 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone1ag1352 | 287 | PRINTS | Major intrinsic protein family signature | 173 | 191 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone1ag1352 | 287 | PRINTS | Major intrinsic protein family signature | 124 | 143 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone1ag1352 | 287 | PRINTS | Major intrinsic protein family signature | 39 | 58 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone1ag1352 | 287 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 10 | 283 | IPR034294 | GO:0005886(PANTHER)|GO:0015250(PANTHER) | |
Cone1ag1352 | 287 | FunFam | Probable aquaporin PIP1-2 | 24 | 285 | - | - | |
Cone1ag1352 | 287 | Pfam | Major intrinsic protein | 32 | 266 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag1352 | Cone-Chr1:56550924 | Cone8ag1291 | Cone-Chr8:10585800 | 3.84E-152 | dispersed | |
Cone1ag0730 | Cone-Chr1:6731374 | Cone1ag1352 | Cone-Chr1:56550924 | 1.42E-173 | wgd | |
Cone1ag1352 | Cone-Chr1:56550924 | Cone10ag0252 | Cone-Chr10:1213414 | 2.71E-179 | wgd | |
Cone1ag1352 | Cone-Chr1:56550924 | Cone18ag0517 | Cone-Chr18:2534956 | 7.60E-183 | wgd | |
Cone1ag1352 | Cone-Chr1:56550924 | Cone3ag0280 | Cone-Chr3:1462429 | 1.05E-77 | wgd | |
Cone1ag1352 | Cone-Chr1:56550924 | Cone5ag0337 | Cone-Chr5:1440129 | 2.44E-197 | wgd | |
Cone1ag1352 | Cone-Chr1:56550924 | Cone5ag1231 | Cone-Chr5:5673499 | 1.84E-176 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag1352 | K09872 | - | mdm:103428693 | 509.605 |