Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1376 ATGGAGGTTCCCAAATTGAGGCGGTCCAACATGAGGAGCTTCGCTCTCCAACTAATCTCCGGGTCATGGTTCATGATGTTTGCTTCCTTCCTCATCATGTCAATGGCCGGAATCCCCTACATGTTCAGCCTTTACTCCGGAACACTTAAATCCGTCCTCGGATACGACCAAACTACTCTCAACTTCATCAGCTTCTTCAAAGACGTCGGAACAACCGTCGGAATCCTTGCCGGACTAATCAATGAGGTGACCCCTCCGTGGGCCGTACTCGCCATGGGAGCGGGCCTCAATTTCTTTGGCTACTTCATGATATATCTCTCTGTCACTCAAAAACTACCCAAGCCTGAAGTCTGGCTCATGTGCTTGTACATCTGCGTTGGAGCAAACGCTACAACGTTTGCCAACACAGGTGCGCTTGTCACGTGCGTTAAAAACTACCCAGAAAAACGTGGGGTCGTTATAGGGATTCTAAAGGGTTATATGGGATTGAGTGGAGCTATTGTTACTCAACTTTACCATGCAATTTATGGGAACGATGCGAAGTCTTTGCTCTTGCTGTTAGGCTGGCTCCCCGCCGTTATTTCCTTTGTTTTTCTCCCTACAGTTCGAAGCCTCAAGGTTAACCATCAGCCCAATGAGCTTCAAGTTTTCTTCAACTTCCTTTACATCTCACTTGGTCTAGCTAGCTTTCTCCTGATCATGATCATTTTCCAACAAAAGTTTAATTTTACCCACAGTGAATACAGTGGCGGTGCAGCTCTGACAGTGTTTTTACTTCTCCTGCCAATTGTTATAGTTTTTGGCGAAGAATTAAAGCTTTGGAAAAACAAGGTTCTAGCTTTAAACGATCCTTCACCGATCAAAATCACAACTACTTCTACTGAAATAGTAGAATCTTCTCCACCTCGATCATCAGCAATAATTAATAATGATAAGAGACAAGATATGTGGTGGGAGAATGTATTCAATCCTCCAAAAAGAGGAGAGGATTTCACTATCCTTCAAGCCCTTTTCAGCATCGACATGTTCATCCTTTTCATCGCCACGGCCTGTGGGGTCGGTGGAACCTTAACGGCGATAGACAATCTAGGTCAAATCGGTGCTTCTCAAGACTACCCGAAAAGAAGTATAAGCACTTTCGTTTCATTAGTAAGCATATGGAACTACCTAGGCCGGGTTTTCTCTGGTTTCGCCTCGGAAATTCTCCTCATCAAATACAAGTTCCCTCGCCCTCTCATGCTCACTCTAGTCCTCCTCTTATCTTGTGCGGGCCATCTTCTTATAGCCTTTAATCCACCCGGAGCTCTCTATATCGCTTCTATCATTACCGGATTTTGTTACGGGGCCCAATGGCCGCTACTTTTCTCGATCGTTTCCGAGCTGTTCGGGCTTAAGTATTACGCGACATTGTATAATTTCGGGTCCGTGGCTAGTCCAGTTGGGTTATATGTATTGAACGTGAATGTTGCTGGACATTTGTACGATAAGGAGGCTAAGAAGCAGTTAGCGGCTTCTGGACTAGCTAGAAAAGCCGGGGAGGAGTTGAATTGCAGTGGGGTTGCGTGCTTTAAGTTGTCTTTTATTATTATCACCGCCGTAACATTTGTTGGTATGGTAGTTTCTTTGATCTTGGTTGTGAGGACGAGGAGGTTTTACCGGAGTGATATCTATAAGAAGTTCAGAGAAGAAGAGGAGGTTGATCGGAAGAATGTGGAATTACAAGGCAACGGAGTTGTTCCTTTGGATGCAAAATATGGACCAAAACAATAG 1770 44.8 MEVPKLRRSNMRSFALQLISGSWFMMFASFLIMSMAGIPYMFSLYSGTLKSVLGYDQTTLNFISFFKDVGTTVGILAGLINEVTPPWAVLAMGAGLNFFGYFMIYLSVTQKLPKPEVWLMCLYICVGANATTFANTGALVTCVKNYPEKRGVVIGILKGYMGLSGAIVTQLYHAIYGNDAKSLLLLLGWLPAVISFVFLPTVRSLKVNHQPNELQVFFNFLYISLGLASFLLIMIIFQQKFNFTHSEYSGGAALTVFLLLLPIVIVFGEELKLWKNKVLALNDPSPIKITTTSTEIVESSPPRSSAIINNDKRQDMWWENVFNPPKRGEDFTILQALFSIDMFILFIATACGVGGTLTAIDNLGQIGASQDYPKRSISTFVSLVSIWNYLGRVFSGFASEILLIKYKFPRPLMLTLVLLLSCAGHLLIAFNPPGALYIASIITGFCYGAQWPLLFSIVSELFGLKYYATLYNFGSVASPVGLYVLNVNVAGHLYDKEAKKQLAASGLARKAGEELNCSGVACFKLSFIIITAVTFVGMVVSLILVVRTRRFYRSDIYKKFREEEEVDRKNVELQGNGVVPLDAKYGPKQ 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56654358 56656306 + Conep01aG0143400.1 Cone1ag1376 432067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1376 589 Pfam Nodulin-like 23 267 IPR010658 -
Cone1ag1376 589 Gene3D MFS general substrate transporter like domains 336 553 IPR036259 -
Cone1ag1376 589 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 22 561 - GO:0016020(PANTHER)
Cone1ag1376 589 CDD MFS_Mch1p_like 23 538 - -
Cone1ag1376 589 FunFam Nodulin family protein 333 554 - -
Cone1ag1376 589 SUPERFAMILY MFS general substrate transporter 20 556 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1376 Cone-Chr1:56654358 Cone5ag0368 Cone-Chr5:1564676 0 dispersed
Cone1ag1376 Cone-Chr1:56654358 Cone11ag1323 Cone-Chr11:9748372 5.04E-227 wgd
Cone1ag1376 Cone-Chr1:56654358 Cone11ag1038 Cone-Chr11:8211021 1.00E-286 wgd
Cone1ag1376 Cone-Chr1:56654358 Cone13ag1248 Cone-Chr13:9498851 6.42E-246 wgd
Cone1ag1376 Cone-Chr1:56654358 Cone18ag0537 Cone-Chr18:2651571 2.07E-92 wgd
Cone1ag1376 Cone-Chr1:56654358 Cone5ag0367 Cone-Chr5:1562366 5.34E-239 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1376 - - - 0.0