Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag1396 | ATGTTGGCGATGGAGAAGGATTTTGATGGCAAGTTAAGGATTCAAGGGACCTCCTCTAATGGCGGGAATGTCCAGAGATCGCAAAGCTTTGCGTTTCGAGCTCCGCAAGAGAATTTCAGCATCCACGATTTCAAATTGGGCAAGATTTATGGCGTTGGTTCCTATTCTAAGGTCGTGAGGGCGAAGAAGAAGGACTCGGGTACAGTTTATGCACTGAAGATAATGGACAAGAAGTTCATAACTAAAGAAAACAAAACTGCTTATGTGAAGCTGGAACGTATTGTACTTGACCAGCTCGATCATCCTGGCGTTATCAAACTATTTTTCACATTTCAAGACACTTATTCACTCTATATGGCGCTTGAATCCTGTGAAGGTGGGGAGCTTTTCGATCAAATTATCCGAAAAGGTCGATTGACAGAAGATGAAGCTCGATTCTATGCAGCAGAAGTTGTGGATGCTCTTGAATACATACACAGTATGGGATTAATACATCGAGATATTAAGCCTGAGAATTTGCTACTTACTTCCAATGGACATATTAAAATCGCCGATTTTGGGAGCGTAAAGCCCACACCAGATAGCCTAATTCCCACTCTTCCAAATGCAGCATCAGAAGGTAAGGCCTGTACATTTGTGGGCACGGCTGCTTATGTTCCTCCAGAAGTTCTTAATTCTTGTCCTCCAACTCTTGGAAATGACCTCTGGGCACTTGGCTGCACCTTGTACCAAATGCTTACAGGGACTAATCCATTCAAAGATGCGAGCGAATGGCTTATTTTCCAAAGAATCATAGCACGAGATGTAAAATATCCTATCTATTTCTCCGATCAAGCTAGAGATCTCATTGACCGACTATTGGATTTAGATCCCAACAAGAGACCTGGTGCGGGACCTGATGGTTATTCTGTGCTTAAGAAGCATCCCTTCTTTAAGGGGGTTGACTGGAAGAATATTAGACAGCAAAGCCCTCCAAAGCTAGCTTTGGAAGAAGCAGTTCAAGCAGGTGAGGAGGAGGATTATGGAGATGATTCTTCATGGAACCCTTCACATGTTGGAGATGGTGCAAAGACCAGTCAAGATGACGGGAATACTGGAGCCGCCGCCTCATCTTCCAAAGAATCTCATAATGTCACTAGACTTGCATCAATCGACTCCTTCGATTCCAAATGGCAACAATTCCTCGAGCCAGGAGAATCCGTACTCATGATCTCATTGGTGAAAAAAGTTCAGACACTAACAAGCAAAAAGGTCCAGCTCATCCTTACCAACAAACCTAAATTGATATATGTGGATCCGTCAAAGTTGATTATCAAGGGGCAAATAATTTGGTCCGACAATCCCAATGAGCTCAGCGTTCAAGTGACTAGTACTTCACATTTCAAGATTTGCACGGCAAAGAAGATTGTATCATTTGAGGATGCGAAACAAAAAGCGTGGCAGTGGAAGAAGGCAATAGAGGCACTTCAGAACCGGTGA | 1479 | 43.34 | MLAMEKDFDGKLRIQGTSSNGGNVQRSQSFAFRAPQENFSIHDFKLGKIYGVGSYSKVVRAKKKDSGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVIKLFFTFQDTYSLYMALESCEGGELFDQIIRKGRLTEDEARFYAAEVVDALEYIHSMGLIHRDIKPENLLLTSNGHIKIADFGSVKPTPDSLIPTLPNAASEGKACTFVGTAAYVPPEVLNSCPPTLGNDLWALGCTLYQMLTGTNPFKDASEWLIFQRIIARDVKYPIYFSDQARDLIDRLLDLDPNKRPGAGPDGYSVLKKHPFFKGVDWKNIRQQSPPKLALEEAVQAGEEEDYGDDSSWNPSHVGDGAKTSQDDGNTGAAASSSKESHNVTRLASIDSFDSKWQQFLEPGESVLMISLVKKVQTLTSKKVQLILTNKPKLIYVDPSKLIIKGQIIWSDNPNELSVQVTSTSHFKICTAKKIVSFEDAKQKAWQWKKAIEALQNR | 492 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 56734111 | 56737427 | + | Conep01aG0145400.1 | Cone1ag1396 | 432087 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag1396 | 492 | ProSiteProfiles | Protein kinase domain profile. | 44 | 311 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag1396 | 492 | MobiDBLite | consensus disorder prediction | 323 | 375 | - | - | |
Cone1ag1396 | 492 | FunFam | 3-phosphoinositide-dependent protein kinase 2-like | 128 | 326 | - | - | |
Cone1ag1396 | 492 | Gene3D | Phosphorylase Kinase; domain 1 | 42 | 127 | - | - | |
Cone1ag1396 | 492 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 163 | 175 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag1396 | 492 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 35 | 327 | IPR050236 | GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER) | |
Cone1ag1396 | 492 | FunFam | 3-phosphoinositide-dependent protein kinase 1 | 361 | 492 | - | - | |
Cone1ag1396 | 492 | MobiDBLite | consensus disorder prediction | 351 | 375 | - | - | |
Cone1ag1396 | 492 | Coils | Coil | 472 | 492 | - | - | |
Cone1ag1396 | 492 | Pfam | Protein kinase domain | 46 | 310 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag1396 | 492 | FunFam | 3-phosphoinositide-dependent protein kinase 2-like | 42 | 127 | - | - | |
Cone1ag1396 | 492 | CDD | STKc_PDK1 | 42 | 311 | IPR039046 | GO:0004674(InterPro) | |
Cone1ag1396 | 492 | Gene3D | Transferase(Phosphotransferase) domain 1 | 128 | 323 | - | - | |
Cone1ag1396 | 492 | SUPERFAMILY | Protein kinase-like (PK-like) | 28 | 328 | IPR011009 | - | |
Cone1ag1396 | 492 | Gene3D | - | 356 | 492 | IPR011993 | - | |
Cone1ag1396 | 492 | SUPERFAMILY | PH domain-like | 305 | 491 | - | - | |
Cone1ag1396 | 492 | SMART | serkin_6 | 44 | 311 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag1396 | 492 | Pfam | PH domain | 389 | 491 | IPR033931 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag1396 | Cone-Chr1:56734111 | Cone5ag1195 | Cone-Chr5:5398973 | 6.22E-54 | dispersed | |
Cone1ag1396 | Cone-Chr1:56734111 | Cone11ag1025 | Cone-Chr11:8118512 | 2.10E-255 | wgd | |
Cone1ag1396 | Cone-Chr1:56734111 | Cone5ag0387 | Cone-Chr5:1653954 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82508 | None | None | None | None | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag1396 | K06276 | - | csv:101212874 | 796.964 |