Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1404 ATGAAATTTTGGTTGGTTTTTAATGTTGGAGACTTGGAGTTAGGTGGTGATAACGGTAGGCCTCTTTCAAGTTCCAACGCTTTTATTATCCCTCCTCCTCACCTGCAATTTCAAGCCTATTATACCCACCTGCAATTTCCAGCTTCCTCCATTCTTATACCCTCATCAACTTCCTCCATTGAGAACATACCCAGTGCCAGAAACATAATGGCTTCACTTGTGACCTCTTTCTCATCTTCTTCACTCTCCTCTTACTACCACCTTATTTTCACCTTCTTAGCCTTTTTCGTTTCGGGTTTGATTTTCTTGCTCACCAAGAAATCCAAATCCAAGCGCTTGAATCTCCCTCCCGGGCCTCCTGGTTGGCCCATTGTTGGAAATCTCTTCCAAGTGGCTCGCTCTGGTAAACCGTTTTTCCAATACGCCGATGAGCTTCGTCAAATTTATGGCCCAATCTTAACTCTCAAAATGGGCACTCGAACGATGATCATCTTAAGCGACTCCAATCTGGTCCACGAAGCTCTGATTAAAAAAGGCGCAGTCTTTGCTAGCCGGCCCAGAGAAACTCCGACGAGAACGATCTTCAGCAGCAATAAATTCTCCGTAAACGCCTCCCTTTACGGCCCGCTATGGCGGTCGCTCCGCCGCAACATGGTGGAGAACATGCTCAGCTCGAGCCGGCTGAAAGAGTTTCGCGACGTCAGAAACAACGCGATGGAGACGCTTATCAGGCGCATCAAAGCTGAAGCTAAAGCTAACGACGACGCCGTTTGGGTGTTGAGAAACGCGCGTTTCGCTGTGTTCTGTATTCTGTTAGCCATGTGTTTCGGGCTCGAAATGGATGAAATAACCGTCGAGAAAATGGACAACGTTCTCAAAACCGTTTTGATCGTACTCGACCCACGAATCGACGATTATCTTCCGATTCTCAGCCCATTCTTCTCCAAACAGAGAAAACGTGCTCTAGAAGTTAGAAACGAACAGATCGAATTCGTCGTGCAGTTTATCAACAGGCGTAGAAGAGCCCTAGCAAATCCTGGTTCTGATAGCATTGCGACGTCGTTTTCATACCTGGACACACTCTTCGATCTGAAAGCCGAAGGACGGAAATCGACGCCGACGGACGCGGAATTAGTCACGCTCTGTTCCGAATTTCTCAACGGCGGCACAGACACCACTGCAACCGCGCTCGAATGGGGTATCGCGCAGCTAATCGTAAATCCAGGAATTCAAGAAAAACTCTACAACGAAATCAAATCAACTGTCGGAGATAGGAAAGTGGATGAGAAAGACGCTGAGAAAATGCCTTATTTGCAAGCTGTAGTCAAAGAGCTGCTTCGGAAACATCCTCCAACCTACTTTTCGCTGACGCACGCGGTGACAGAGAATACTAAACTAGGCGGTTACGATATTCCGACGGATGCGAACGTGGAGATCTTCTTGCCGTCGATCGGGCAAGATCCGAAGCTGTGGAAGAATCCGGAGAAGTTTGATCCGGAGAGGTTTCTGTCCGGCGAGGAAGATGCGGACATAACGGGAGTAAGAGGGGTGAAAATGTTGCCGTTTGGTGTTGGAAGAAGGATCTGCCCTGGATTGGGAATGGCGACGGTTCATGTTCATCTAATGCTAGCGAGAATGGTGCAGGAATTCGAGTGGAGTGCTTTTCCCGAAGATAGCAAGATTGATTTTACAGGGAAGCTGGAATTCACTGTGGTGATGAAGAATCCTCTTAGAGCTAAGGTTAAGCCTAGAGTTTAA 1758 47.72 MKFWLVFNVGDLELGGDNGRPLSSSNAFIIPPPHLQFQAYYTHLQFPASSILIPSSTSSIENIPSARNIMASLVTSFSSSSLSSYYHLIFTFLAFFVSGLIFLLTKKSKSKRLNLPPGPPGWPIVGNLFQVARSGKPFFQYADELRQIYGPILTLKMGTRTMIILSDSNLVHEALIKKGAVFASRPRETPTRTIFSSNKFSVNASLYGPLWRSLRRNMVENMLSSSRLKEFRDVRNNAMETLIRRIKAEAKANDDAVWVLRNARFAVFCILLAMCFGLEMDEITVEKMDNVLKTVLIVLDPRIDDYLPILSPFFSKQRKRALEVRNEQIEFVVQFINRRRRALANPGSDSIATSFSYLDTLFDLKAEGRKSTPTDAELVTLCSEFLNGGTDTTATALEWGIAQLIVNPGIQEKLYNEIKSTVGDRKVDEKDAEKMPYLQAVVKELLRKHPPTYFSLTHAVTENTKLGGYDIPTDANVEIFLPSIGQDPKLWKNPEKFDPERFLSGEEDADITGVRGVKMLPFGVGRRICPGLGMATVHVHLMLARMVQEFEWSAFPEDSKIDFTGKLEFTVVMKNPLRAKVKPRV 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56772292 56774214 + Conep01aG0146200.1 Cone1ag1404 432095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1404 585 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 522 531 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone1ag1404 585 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 97 584 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Cone1ag1404 585 Gene3D Cytochrome P450 107 585 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1404 585 SUPERFAMILY Cytochrome P450 116 584 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1404 585 Pfam Cytochrome P450 116 580 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1404 585 FunFam Cytochrome P450 family protein 109 585 - -
Cone1ag1404 585 CDD CYP77_89 148 578 - -
Cone1ag1404 585 PRINTS E-class P450 group I signature 529 552 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1404 585 PRINTS E-class P450 group I signature 480 504 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1404 585 PRINTS E-class P450 group I signature 377 394 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1404 585 PRINTS E-class P450 group I signature 519 529 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1404 585 PRINTS E-class P450 group I signature 397 423 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1404 585 PRINTS E-class P450 group I signature 439 457 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1404 585 PRINTS E-class P450 group I signature 146 165 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1404 585 PRINTS E-class P450 group I signature 170 191 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1404 585 PRINTS P450 superfamily signature 388 405 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1404 585 PRINTS P450 superfamily signature 529 540 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1404 585 PRINTS P450 superfamily signature 520 529 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1404 585 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1404 Cone-Chr1:56772292 Cone2ag0385 Cone-Chr2:2030918 2.77E-99 dispersed
Cone5ag0636 Cone-Chr5:2719674 Cone1ag1404 Cone-Chr1:56772292 1.93E-33 dispersed
Cone1ag0003 Cone-Chr1:58932 Cone1ag1404 Cone-Chr1:56772292 2.20E-151 transposed
Cone1ag1404 Cone-Chr1:56772292 Cone13ag1219 Cone-Chr13:9392057 9.56E-55 wgd
Cone1ag1404 Cone-Chr1:56772292 Cone19ag1205 Cone-Chr19:8413747 1.44E-60 wgd
Cone1ag1404 Cone-Chr1:56772292 Cone5ag0394 Cone-Chr5:1690467 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1404 K21995 - mdm:103408446 858.211