Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1422 ATGGGAGTAGACGCAGTAATGGGTGATGATTTTCTGAAAGAGAGAGCAAGGGTGATGAGAGAATCACTTCAAAAGAGCGAAACTATCACCGAAAACGTCGTCTCCATACTAGGCTCTTTTGACCACCGCCTCTCCGCCCTTGAAACCGCCATGCGGCCCACTCAGATTAAAACTCATTCTATTAGGAAAGCTCACGAAAATATCGACAAGACCATGAAAGCTGCTGATGTGATATTGGCTCAATTCGATCTTTCTCGTCAGGCAGAAGGGAAAATACTGAAGGGGCCCCATGAGAACTTAGAGAGTTATCTAGAAGCAATTGGTCAGATAAGAAGTAATATTCAGTTCTTTAGCAGCAACAAAGGGTTTAGAAGTAGCGAGGCAGTGATTAACCATGCGAATAGTTTGCTCAGTAAAGCTATTTCAAAGCTTGAAGACCAGTTTAAACAGCTCTTATCATCTTACAGCAAACCTGTGGAGCCAGAACGTCTTTTTGAGTGCCTTCCCAATTCTCTTCGACCATCTTCTGATTCTTCTGGTCAACCGGGGGATTCAAAGTATCCTTCATCAAATAGACATTCTGACCAAGAAACTAGCGTAGAAACTGCAGTTTTCACTCCTCCCACTCTTATCCCACCAAGGGTCCTACCACTTCTCCATGATTTGGCCCAACAGATGATTCAAGCTGGTCACCAACAGCAATTTCTCAAAATTTACAGGGATACTCGATCTATGGTTTTGGAAGAAAGTCTTCGAAAATTGGGCGTTGAAAAATTAAGCAAAGAGGATGTTCAAAAGATGCAATGGGAGGTTTTAGAGGCCAAGATTGGGAACTGGATTCACTTCATGCGAATTGCGGTAAAACTGCTTTTTTCCGGAGAAAGAAAGGTTTGCGATCAAATATTGGAAGGCTTTGGTTCTCTTAGAGATCAGTGCTTTGCCGAAGTTACTACTAGTAGTGTCTCAGTTCTATTCAGTTTTGGAGACGCAATAGCTAAAAGCAAGAGGTCACCCGAAAAGTTATTTGTGCTTTTGGACATGTATGAAATAATGCAAGAGCTTCACTCAGAGATTGAGACAATATTCAGGGGGAAAGCTTGCAGTGAAATTACTGCATCCGCATTGGGTTTGACTAGACAGCTTGCCAAGACAGCCGAAGAGACATTTGGGGATTTTGAGGAAGCTGTTGAAAAAGATGCAACGAAGACAGCTGTTTTGGATGGAACGGTTCATCCTCTAACGAGCTATGTGATTAACTACGTGAAGTTCCTTTTCGACTATCAGTCAACCTTGAAACAACTTTTCCAAGACTTAGAAAGTGGAGATCAAACTGGCTCACAATTAGCCACTGTTACAATGAATATAATGAAGGCACTTCAAGCCAATTTGGATGGGAAATCTAAACAGTACAGAGATCCTGCCTTGACACACTTATTCCTCATGAACAACATTCATTATATTGTCAGATCCGTTCGTAGGTCAGAAGCCAAGGACTTATTAGGGGATGATTGGGTTCAGAGGCATAGAAGAATTGTACAGCAACATGCAAATCTGTACAAAAGAAGTGCTTGGGGAAAGATTTTGCAATGCCTCACTATCCAAGGTCTGAGCTCATCCGGCGGTGGTAGTGGGACCGGTGGAGATGGAGGGAGTAGTGGAGCCTCAAGAGCAGTCGTTAAAGACAGGTTTAAGACATTCAATGCGCAATTTGAGGAACTTCATCAAAAACAATCTCAATGGACCGTCCCTGATACCGAGTTGCGTGAATCGCTTAGACTCGCTGTTGCAGAAGTCTTGTTGCCTGCCTATCGATCTTTTCTAAAACGTTACGGGCCTTTAGTAGACAATGTAAAGAACACCCAGAAATATATTAGGTACCAACCAGAGGACCTTGAAAGAATGTTGGGTGAATTTTTTGAGGGGAGGAATGTGAATGAACCCAAGAGGTAG 1950 42.77 MGVDAVMGDDFLKERARVMRESLQKSETITENVVSILGSFDHRLSALETAMRPTQIKTHSIRKAHENIDKTMKAADVILAQFDLSRQAEGKILKGPHENLESYLEAIGQIRSNIQFFSSNKGFRSSEAVINHANSLLSKAISKLEDQFKQLLSSYSKPVEPERLFECLPNSLRPSSDSSGQPGDSKYPSSNRHSDQETSVETAVFTPPTLIPPRVLPLLHDLAQQMIQAGHQQQFLKIYRDTRSMVLEESLRKLGVEKLSKEDVQKMQWEVLEAKIGNWIHFMRIAVKLLFSGERKVCDQILEGFGSLRDQCFAEVTTSSVSVLFSFGDAIAKSKRSPEKLFVLLDMYEIMQELHSEIETIFRGKACSEITASALGLTRQLAKTAEETFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQSTLKQLFQDLESGDQTGSQLATVTMNIMKALQANLDGKSKQYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANLYKRSAWGKILQCLTIQGLSSSGGGSGTGGDGGSSGASRAVVKDRFKTFNAQFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRSFLKRYGPLVDNVKNTQKYIRYQPEDLERMLGEFFEGRNVNEPKR 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56849045 56852750 + Conep01aG0148000.1 Cone1ag1422 432113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1422 649 MobiDBLite consensus disorder prediction 169 202 - -
Cone1ag1422 649 PANTHER EXOCYST COMPLEX PROTEIN EXO70 15 641 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cone1ag1422 649 Gene3D Exocyst complex component Exo70 76 649 - -
Cone1ag1422 649 SUPERFAMILY Cullin repeat-like 78 640 IPR016159 -
Cone1ag1422 649 Pfam Exocyst complex component Exo70 N-terminal 71 153 - -
Cone1ag1422 649 Pfam Exo70 exocyst complex subunit C-terminal 278 636 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cone1ag1422 649 MobiDBLite consensus disorder prediction 171 202 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1144 Cone-Chr13:9041662 Cone1ag1422 Cone-Chr1:56849045 0 dispersed
Cone19ag1123 Cone-Chr19:8061899 Cone1ag1422 Cone-Chr1:56849045 0 dispersed
Cone1ag1422 Cone-Chr1:56849045 Cone20ag1348 Cone-Chr20:8666061 6.81E-109 dispersed
Cone11ag0966 Cone-Chr11:7837112 Cone1ag1422 Cone-Chr1:56849045 0 transposed
Cone1ag1422 Cone-Chr1:56849045 Cone5ag0416 Cone-Chr5:1766096 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1422 K07195 - cit:102629699 1019.22