Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1457 ATGAGCTCTATGGGAATTTTTGAAGAGATGGGTTTTTGTGGTAGCCTAGATTTTCTTTCGGCCCCTCCTGGAGAACAGGAGGCTGCACCAGAGCATGAACCTGAGGCAATGGAAGAGGAGGATTATAGTGACGAAGAGGTTGATGTTGACGAGCTTGAGAGGAGGATGTGGAGAGACCGAATGCTATTGAAGCGCCTCAAAGAGAAAAACAAGGGAAAGGAAGGGGACGGCAATACAAAGCGGCTTCAATCCCAAGAGCAAGCCCGCAGAAAGAAGATGTCAAGAGCACAAGATGGTATTCTCAAATACATGTTGAAAATGATGGAGGTTTGTAAAGCTCAGGGTTTCGTTTATGGGATCATTCCCGAGAAAGGAAAACCGGTTAGTGGAGCCTCTGACAATCTCCGTGCATGGTGGAAAGAGAAAGTTCGATTTGACCGTAACGGGCCAGCAGCAATTTCCAAGTATCAGGCTGATCATTCAATCTCAGGCAAGAACGAGGACTGCAGTGCTGTAACATCTGCTCACACTTTACAGGAGCTTCAAGACACAACCCTTGGGTCACTATTGTCTGCTATGATGCAGCATTGTGATCCGCCCCAGAGGCGGTTCCCACTAGACAAGGGTGTTGCTCCGCCGTGGTGGCCCACAGGAGATGAGTGGTGGTGGTCGGAGTTGGGTTTACCCAAGGAAGGGCCTCCACCTTACAAGAAGCCTCATGATCTGAAAAAGGCCTGGAAGGTTAGTGTTCTCACAGCAGTGATTAAGCACATGTCCCCTGATATTGCCAAGATCCGAAAACTTGTTCGCCAGTCTAAATGCCTGCAGGACAAAATGACTGCTAAGGAGAGTGCTACTTGGCTTGCCATTGTAAACCAGGAAGAAGCTCTTGCCCGAAAGTTGTATCCTGATAGATGTCAATCTGTAATGGCTGGTGGGAGTGGGTCCCTTGTGATCAGTGGTACAAGTGATTATGATGTGGAAGGAGTGGTTGATCCGACGGTTGATGTAGATGAATGCAAGCCTTGTGATATCAATGTCAATCTTTTCAATGTTGGAGCTTCTGGACCAAAAGATAATAATAATAGGCTTATGACACCAACTATGGCTACTCAGATTAAGGGAGAGCTCATGGGAATTGCCTCGGATTTCACGCCAAAGCGTAAACAGCTGGCTGAAGAAGATGTTCTGGTGGATCATAAGCTATATCCTTGTGAGTTTTCTAGATGTCCGTATAGTGATCTAAGGCTTGCATTTCTTGACAGGACTGCAAGAAACAATCACCAAATGACTTGTCCGTATAGGAGCTATTCTTCTCTGCAGATGGCTTTTGGAATGTCAAACTTCCAATTAACCAATGAGAAAGGTCCTCTCCTTTCTCTACCCTTTGCTCCACCACCTAGTAAGCCAGCCACTCCGCCTGTTACAAACCAAATCTCTCCTTTCACTGACAATGATGGGCAGAGGATGATTTCCGAGCTTTTCACATTTTATGATTCTAATCCAGAAGGCAACAAGATTCTACATTCTGGGAACCTCAGTGTTAAAGAGCAGCAGCAGCAACAACAAATCCAGCTTCAGGGGGATAACTTTTATGGCCAAAGTTACATAATGGCAAGCAGCAAATCTGAAGAGACAAATACTCAGATGCATCAAACGGGTTTTCCATCCATGAATATGCAGTTTGATTCACCATTCCCTATCAATCCAAATGAAAACATAGCTGGCTTGAGTTTCGGTCCTCCATACTCTGCAGATCAACTGCCAAAGCAAGAAACCTCCTTGTGGTATCTTTGA 1797 45.69 MSSMGIFEEMGFCGSLDFLSAPPGEQEAAPEHEPEAMEEEDYSDEEVDVDELERRMWRDRMLLKRLKEKNKGKEGDGNTKRLQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAISKYQADHSISGKNEDCSAVTSAHTLQELQDTTLGSLLSAMMQHCDPPQRRFPLDKGVAPPWWPTGDEWWWSELGLPKEGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIVNQEEALARKLYPDRCQSVMAGGSGSLVISGTSDYDVEGVVDPTVDVDECKPCDINVNLFNVGASGPKDNNNRLMTPTMATQIKGELMGIASDFTPKRKQLAEEDVLVDHKLYPCEFSRCPYSDLRLAFLDRTARNNHQMTCPYRSYSSLQMAFGMSNFQLTNEKGPLLSLPFAPPPSKPATPPVTNQISPFTDNDGQRMISELFTFYDSNPEGNKILHSGNLSVKEQQQQQQIQLQGDNFYGQSYIMASSKSEETNTQMHQTGFPSMNMQFDSPFPINPNENIAGLSFGPPYSADQLPKQETSLWYL 598
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56975016 56978697 - Conep01aG0151700.1 Cone1ag1457 432148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1457 598 MobiDBLite consensus disorder prediction 67 93 - -
Cone1ag1457 598 MobiDBLite consensus disorder prediction 17 49 - -
Cone1ag1457 598 FunFam Ethylene insensitive 3-like 1 82 160 - -
Cone1ag1457 598 Gene3D - 83 164 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cone1ag1457 598 Gene3D - 167 306 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cone1ag1457 598 FunFam Ethylene insensitive 3-like 1 169 305 - -
Cone1ag1457 598 MobiDBLite consensus disorder prediction 32 48 - -
Cone1ag1457 598 Coils Coil 35 69 - -
Cone1ag1457 598 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 6 566 IPR006957 GO:0003677(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(InterPro)
Cone1ag1457 598 SUPERFAMILY DNA-binding domain of EIN3-like 175 298 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cone1ag1457 598 Pfam Ethylene insensitive 3, DNA-binding domain 50 295 IPR047091 GO:0003700(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1457 Cone-Chr1:56975016 Cone5ag0446 Cone-Chr5:1893514 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45514 PF01112 Asparaginase_2 7.10E-74 CL0052 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1457 K14514 - vvi:100250496 759.214