Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag1459 | ATGGGGATTCAAACAATGGGATCTCAGGGAGGGAGTGATGGGAACGGCAAGCAATCCCAATTCCAGTTATTGGCTCGTCAGAACTCACTGTACAGTCTTACTCTCGACGAGGTCCAAAATCAGTTGGGTGACTTGGGAAAGCCACTGAACAGCATGAACCTTGACGAGCTTCTCAAAAATGTATGGACAGCAGAGGTTAGCCAGTCCGTGAGTATGGATATTGAGGGTACTTCCTTGGCCAATCAAACAAGCCTGCAACGCCAGTCAAGCCTTTCATTAACTAATGCGCTGAGCAAGAAGACAGTTGATGAAGTTTGGAGAGATATTCAACAGAGCAAAAATGACGAGGGGAAGAAATCCCGGGATAGACAACCTACCTTAGGAGAGATGACTCTGGAGGATTTTTTGGTGAAAGCTGGAGTTGTTGCTGAAGGGGCGGATAAAAGGGGTATGGGTCCTGCTGTTGAAGTTGATGCAAGTGTGGTCCCGCAGTTTCCCCAACAAAGTCAGTGGATGCAATATCCGCAGCCGCCATATCAGCATCCGCAGCAAAGCATGATGGGGGTTTATATGCCAGGCCAGCCTATGCCACAGCCGTTGCATGTGGTCCCGGGTGCCATTATGGATGTTCCATATGCTGACAACCAGGTAAGGTTAGCATCTCCTTTAATGGGGACGTTATCTGATACACCGGTACCTGGAAGGAAGAGAAGTGCCCCTGAGGAAATAATTGAGAAGACTGTGGAGCGAAGGCAGAAGAGGATGATAAAGAACAGGGAATCAGCTGCCCGATCACGGGCTAGGAAGCAGGCGTACACCAATGAATTGGAGAACAAAGTCTCACGTTTAGAAGAGGAAAATGAAAGGCTCAGGGCACGGAAGGAGCTAGAGAATATGCTGCCATCCACACCTCCTCCTGAGCCTAAGTATCAGCTACGCAGAACGTCATCCGCCCCACTCTAA | 963 | 49.22 | MGIQTMGSQGGSDGNGKQSQFQLLARQNSLYSLTLDEVQNQLGDLGKPLNSMNLDELLKNVWTAEVSQSVSMDIEGTSLANQTSLQRQSSLSLTNALSKKTVDEVWRDIQQSKNDEGKKSRDRQPTLGEMTLEDFLVKAGVVAEGADKRGMGPAVEVDASVVPQFPQQSQWMQYPQPPYQHPQQSMMGVYMPGQPMPQPLHVVPGAIMDVPYADNQVRLASPLMGTLSDTPVPGRKRSAPEEIIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRARKELENMLPSTPPPEPKYQLRRTSSAPL | 320 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 56983815 | 56986410 | - | Conep01aG0151900.1 | Cone1ag1459 | 432150 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag1459 | 320 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 253 | 268 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone1ag1459 | 320 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cone1ag1459 | 320 | MobiDBLite | consensus disorder prediction | 251 | 296 | - | - | |
Cone1ag1459 | 320 | CDD | bZIP_plant_BZIP46 | 250 | 296 | - | - | |
Cone1ag1459 | 320 | FunFam | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | 248 | 300 | - | - | |
Cone1ag1459 | 320 | Pfam | bZIP transcription factor | 250 | 293 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone1ag1459 | 320 | MobiDBLite | consensus disorder prediction | 251 | 320 | - | - | |
Cone1ag1459 | 320 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 26 | 318 | IPR043452 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro) | |
Cone1ag1459 | 320 | SUPERFAMILY | Leucine zipper domain | 250 | 295 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone1ag1459 | 320 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 248 | 293 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone1ag1459 | 320 | Gene3D | - | 248 | 301 | - | - | |
Cone1ag1459 | 320 | SMART | brlzneu | 246 | 302 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone1ag1459 | 320 | Coils | Coil | 266 | 300 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0988 | Cone-Chr11:7935542 | Cone1ag1459 | Cone-Chr1:56983815 | 7.56E-115 | dispersed | |
Cone11ag1555 | Cone-Chr11:10840297 | Cone1ag1459 | Cone-Chr1:56983815 | 1.23E-67 | dispersed | |
Cone18ag0589 | Cone-Chr18:2935282 | Cone1ag1459 | Cone-Chr1:56983815 | 8.70E-132 | dispersed | |
Cone1ag1459 | Cone-Chr1:56983815 | Cone8ag1129 | Cone-Chr8:9956494 | 1.29E-35 | dispersed | |
Cone1ag1459 | Cone-Chr1:56983815 | Cone5ag0448 | Cone-Chr5:1901147 | 1.24E-181 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45515 | PF03767 | Acid_phosphat_B | 7.50E-75 | CL0137 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag1459 | K14432 | - | mdm:103438647 | 466.463 |