Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1459 ATGGGGATTCAAACAATGGGATCTCAGGGAGGGAGTGATGGGAACGGCAAGCAATCCCAATTCCAGTTATTGGCTCGTCAGAACTCACTGTACAGTCTTACTCTCGACGAGGTCCAAAATCAGTTGGGTGACTTGGGAAAGCCACTGAACAGCATGAACCTTGACGAGCTTCTCAAAAATGTATGGACAGCAGAGGTTAGCCAGTCCGTGAGTATGGATATTGAGGGTACTTCCTTGGCCAATCAAACAAGCCTGCAACGCCAGTCAAGCCTTTCATTAACTAATGCGCTGAGCAAGAAGACAGTTGATGAAGTTTGGAGAGATATTCAACAGAGCAAAAATGACGAGGGGAAGAAATCCCGGGATAGACAACCTACCTTAGGAGAGATGACTCTGGAGGATTTTTTGGTGAAAGCTGGAGTTGTTGCTGAAGGGGCGGATAAAAGGGGTATGGGTCCTGCTGTTGAAGTTGATGCAAGTGTGGTCCCGCAGTTTCCCCAACAAAGTCAGTGGATGCAATATCCGCAGCCGCCATATCAGCATCCGCAGCAAAGCATGATGGGGGTTTATATGCCAGGCCAGCCTATGCCACAGCCGTTGCATGTGGTCCCGGGTGCCATTATGGATGTTCCATATGCTGACAACCAGGTAAGGTTAGCATCTCCTTTAATGGGGACGTTATCTGATACACCGGTACCTGGAAGGAAGAGAAGTGCCCCTGAGGAAATAATTGAGAAGACTGTGGAGCGAAGGCAGAAGAGGATGATAAAGAACAGGGAATCAGCTGCCCGATCACGGGCTAGGAAGCAGGCGTACACCAATGAATTGGAGAACAAAGTCTCACGTTTAGAAGAGGAAAATGAAAGGCTCAGGGCACGGAAGGAGCTAGAGAATATGCTGCCATCCACACCTCCTCCTGAGCCTAAGTATCAGCTACGCAGAACGTCATCCGCCCCACTCTAA 963 49.22 MGIQTMGSQGGSDGNGKQSQFQLLARQNSLYSLTLDEVQNQLGDLGKPLNSMNLDELLKNVWTAEVSQSVSMDIEGTSLANQTSLQRQSSLSLTNALSKKTVDEVWRDIQQSKNDEGKKSRDRQPTLGEMTLEDFLVKAGVVAEGADKRGMGPAVEVDASVVPQFPQQSQWMQYPQPPYQHPQQSMMGVYMPGQPMPQPLHVVPGAIMDVPYADNQVRLASPLMGTLSDTPVPGRKRSAPEEIIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRARKELENMLPSTPPPEPKYQLRRTSSAPL 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56983815 56986410 - Conep01aG0151900.1 Cone1ag1459 432150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1459 320 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 253 268 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone1ag1459 320 MobiDBLite consensus disorder prediction 1 21 - -
Cone1ag1459 320 MobiDBLite consensus disorder prediction 251 296 - -
Cone1ag1459 320 CDD bZIP_plant_BZIP46 250 296 - -
Cone1ag1459 320 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 248 300 - -
Cone1ag1459 320 Pfam bZIP transcription factor 250 293 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone1ag1459 320 MobiDBLite consensus disorder prediction 251 320 - -
Cone1ag1459 320 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 26 318 IPR043452 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro)
Cone1ag1459 320 SUPERFAMILY Leucine zipper domain 250 295 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone1ag1459 320 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 248 293 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone1ag1459 320 Gene3D - 248 301 - -
Cone1ag1459 320 SMART brlzneu 246 302 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone1ag1459 320 Coils Coil 266 300 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0988 Cone-Chr11:7935542 Cone1ag1459 Cone-Chr1:56983815 7.56E-115 dispersed
Cone11ag1555 Cone-Chr11:10840297 Cone1ag1459 Cone-Chr1:56983815 1.23E-67 dispersed
Cone18ag0589 Cone-Chr18:2935282 Cone1ag1459 Cone-Chr1:56983815 8.70E-132 dispersed
Cone1ag1459 Cone-Chr1:56983815 Cone8ag1129 Cone-Chr8:9956494 1.29E-35 dispersed
Cone1ag1459 Cone-Chr1:56983815 Cone5ag0448 Cone-Chr5:1901147 1.24E-181 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45515 PF03767 Acid_phosphat_B 7.50E-75 CL0137 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1459 K14432 - mdm:103438647 466.463